From 062f72015a15bb78078e8c84d3e36c1bce882e51 Mon Sep 17 00:00:00 2001 From: aduvermy <arnaud.duvermy@ens-lyon.fr> Date: Thu, 2 Nov 2023 12:37:45 +0100 Subject: [PATCH] update Readme --- README.md | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/README.md b/README.md index 9cafffc..42aaad2 100644 --- a/README.md +++ b/README.md @@ -103,7 +103,7 @@ mock_data <- mock_rnaseq(input_var_list, ``` -The simulation process in HTRfit has been optimized to generate RNAseq counts for 30,000 genes and 4,000 experimental conditions, each replicated 4 times, resulting in a total of 16,000 samples, in less than 5 minutes. However, the object generated by the framework under these conditions can consume a significant amount of RAM, approximately 50 GB. For an equivalent simulation with 6,000 genes, less than a minute and 10 GB of RAM are required. +The simulation process in HTRfit has been optimized to generate RNAseq counts for 30,000 genes and 4,000 experimental conditions (2000 levels in varA, 2 levels in varB), each replicated 4 times, resulting in a total of 16,000 samples, in less than 5 minutes. However, the object generated by the framework under these conditions can consume a significant amount of RAM, approximately 50 GB. For an equivalent simulation with 6,000 genes, less than a minute and 10 GB of RAM are required. <div id="bg" align="center"> -- GitLab