diff --git a/doc/admin/README.md b/doc/admin/README.md index 0dfc14db061123f335137c7356ae169669f7b222..1ec98976261b9acfd0cc4a46b8181030cca7db65 100755 --- a/doc/admin/README.md +++ b/doc/admin/README.md @@ -259,17 +259,17 @@ Clicking the `CopySeq` button copies the full oligo sequence to your clipboard. | Id | Integer | A unique integer | | Name | Character string | Strain's name (free text) | | Species | Character string | Strain's species. Dropdown selection made from the `name` field of the `species` table. | -| Other names | Character string | Strain's other name. Optionnal | +| Other names | Character string | Strain's other name. Optional. | | General background | Character string | Genetic background of the strain. Dropdown selection made from the `name` field of the `backgrounds` table. | | Comments | Character string | A description of the strain (free text) | | Mating type | Character string | Strain's mating type. Dropdown selection made from the `alleles` field of the `st_mats` table. | -| ade2 | Character string | Modifications at ade2 locus. Leave empty if none. Dropdown selection made from the `alleles` field of the `st_ade2s` table. | -| his3 | Character string | Modifications at his3 locus. Leave empty if none. Dropdown selection made from the `alleles` field of the `st_his3s` table. | -| leu2 | Character string | Modifications at leu2 locus. Leave empty if none. Dropdown selection made from the `alleles` field of the `st_leu2s` table. | -| met15 | Character string | Modifications at met15 locus. Leave empty if none. Dropdown selection made from the `alleles` field of the `st_met15s` table. | -| trp1 | Character string | Modifications at trp1 locus. Leave empty if none. Dropdown selection made from the `alleles` field of the `st_trp1s` table. | -| ura3 | Character string | Modifications at ura3 locus. Leave empty if none. Dropdown selection made from the `alleles` field of the `st_ura3s` table. | -| ho | Character string | Modifications at ho locus. Leave empty if none. Freetext | +| ade2 | Character string | Modifications at *ADE2* locus. Leave empty if none. Dropdown selection made from the `alleles` field of the `st_ade2s` table. | +| his3 | Character string | Modifications at *HIS3* locus. Leave empty if none. Dropdown selection made from the `alleles` field of the `st_his3s` table. | +| leu2 | Character string | Modifications at *LEU2* locus. Leave empty if none. Dropdown selection made from the `alleles` field of the `st_leu2s` table. | +| met15 | Character string | Modifications at *MET15* locus. Leave empty if none. Dropdown selection made from the `alleles` field of the `st_met15s` table. | +| trp1 | Character string | Modifications at *TRP1* locus. Leave empty if none. Dropdown selection made from the `alleles` field of the `st_trp1s` table. | +| ura3 | Character string | Modifications at *URA3* locus. Leave empty if none. Dropdown selection made from the `alleles` field of the `st_ura3s` table. | +| ho | Character string | Modifications at *HO* locus. Leave empty if none. Freetext | | locus1 | Character string | Modifications at a locus not mentionned in other fields. Free text | | locus2 | Character string | Modifications at a locus not mentionned in other fields. Free text | | locus3 | Character string | Modifications at a locus not mentionned in other fields. Free text | @@ -277,11 +277,11 @@ Clicking the `CopySeq` button copies the full oligo sequence to your clipboard. | locus5 | Character string | Modifications at a locus not mentionned in other fields. Free text | | Parental strain | Character string | The id of the strain from which this one was obtained. Free text | | Obtained by | Character string | Method used to obtain the strain. Free text | -| Checkings | Character string | Checkings performed on this strain such as PCR, or microscopy | -| Extrachromosomal plasmid | Character string | Any plamid present in this strain | -| Cytoplasmic character | Character string | Modifications of cytoplasmic contents. Free text. | -| Reference | Character string | Litterature refenrence related to the strain | -| Author | Character string | Person authoring this strain. Dropdown selection made from the `name` field of the `users` table. | +| Checkings | Character string | Checkings performed on this strain such as PCR, microscopy, phenotyping... | +| Extrachromosomal plasmid | Character string | Any plasmid present in this strain | +| Cytoplasmic character | Character string | Known cytoplasmic characters of the stran, such as PSI+ prion or *rho0* mitochondrial DNA loss. Free text. | +| Reference | Character string | Litterature reference related to the strain, free text. | +| Author | Character string | Person (lab member) authoring this strain. Dropdown selection made from the `name` field of the `users` table. | | Relevant plasmids | Character string | Plasmids related to the design of the strain. Free text | | Relevant oligos | Character string | Oligos related to the design of the strain. Free text | | Files | Media files | Uploaded media files of any format that you want to be associated with the strain | @@ -301,10 +301,10 @@ Clicking the `CopySeq` button copies the full oligo sequence to your clipboard. | Antigen | Character string | Antibody's antigen (free text) | | Host | Character string | Host of the antibody. Dropdown selection made from the `name` field of the `hosts` table. | | Supplier | Character string | The company or service who supplied the oligo. Dropdown selection made from the `name` field of the `suppliers` table | -| Type | Character string | Type of antibody. Dropdown selection made from the `name` field of the `xxx` table. | +| Type | Character string | Type of antibody. Dropdown selection (Monoclonal, Polyclonal) defined in the BREAD of this table. | | Productid | Character string | Supplier's reference of the antibody (free text) | | Batchid | Character string | Production batch reference (free text) | -| Instock | Character string | Stock status of the antibody. Dropdown selection made from the `name` field of the `xxx` table. | +| Instock | Character string | Stock status of the antibody. Dropdown selection made from the `name` field of the `availabilities` table. | | Ordered By | Character string | Person who ordered this antibody. Dropdown selection made from the `name` field of the `users` table. | | Comments | Character string | A description or comment about the antibody (free text) | | Created At | Timestamp | Timestamp of the record in the database | @@ -363,7 +363,7 @@ Clicking the `CopySeq` button copies the full oligo sequence to your clipboard. | Brand | Character string | Pipet's brand. Dropdown selection made from the `name` field of the `suppliers` table. | | Type | Character string | Pipet's type such as volume of number of channels. Dropdown selection made from the `name` field of the `pipet_types` table. | | Files | Media Files | Uploaded media files of any format that you want to be associated with the pipet. | -| History | Character string | xxx | +| History | Character string | Information on history of the pipet | | Created at | Timestamp | Timestamp of the record in the database | | Updated at | Timestamp | Timestamp of updates |