From ddba8d6084eeabc8a37ee0ed11e8f90d9b6fc46a Mon Sep 17 00:00:00 2001
From: Xavier Grand <157-xgrand@users.noreply.gitbio.ens-lyon.fr>
Date: Mon, 25 Jul 2022 14:47:05 +0200
Subject: [PATCH] Modif star/main_2.7.8a.nf process mapping_withindex

---
 src/RNAseq_XGR.nf | 2 +-
 1 file changed, 1 insertion(+), 1 deletion(-)

diff --git a/src/RNAseq_XGR.nf b/src/RNAseq_XGR.nf
index da0831e..6de262b 100644
--- a/src/RNAseq_XGR.nf
+++ b/src/RNAseq_XGR.nf
@@ -123,7 +123,7 @@ workflow {
   //########################## QUALITY CHECKS ###################
 
   // fastqc_rawdata
-  fastqc_raw(fastq_files.collect())
+  fastqc_raw(fastq_files)
   // fastqc_processed
   fastqc_preprocessed(fastp.out.fastq.map { it -> [it [0], it[1]]})
   // multiqc
-- 
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