diff --git a/src/RNAseq_XGR.nf b/src/RNAseq_XGR.nf index 3da0abc89218f6760a52a807dd0c8d0fe015238e..317f62982b68862ace315ad7f082c2b6aa39e9f6 100644 --- a/src/RNAseq_XGR.nf +++ b/src/RNAseq_XGR.nf @@ -89,6 +89,7 @@ log.info "Genome index location: ${params.idx}" Channel .fromFilePairs( params.fastq, size: -1 ) .set { fastq_files } + .view() Channel .fromPath( params.gtf ) @@ -123,8 +124,6 @@ include { index_bam } from "./nf_modules/samtools/main.nf" workflow { - fastq_files.view() - //########################## PREPROCESSING #################### // fastp fastp(fastq_files)