#!/usr/bin/env python3 # -*- coding: UTF-8 -*- """ Description: Configuration folder """ from ..db_utils.config import Config def get_community_file(project: str, weight: int, global_weight: int, same_gene: bool, is_fig: bool = False): """ Get the output file of interest. :param project: Name of the project of interest :param weight: The minimum weight of interaction to consider :param global_weight: The global weight to consider. if \ the global weight is equal to 0 then then density figure are calculated \ by project, else all projet are merge together and the interaction \ seen in `global_weight` project are taken into account :param same_gene: Say if we consider as co-localised exon within the \ same gene :return: The filename of interest """ folder = ConfigGraph.community_folder folder.mkdir(exist_ok=True, parents=True) if is_fig: ext = '.html' else: ext = '.txt' if global_weight != 0: project = f"global-weight-{global_weight}" return folder / f"{project}_weight-{weight}_same_gene-{same_gene}{ext}" class ConfigGraph: """ Class containing all the variables that will be used in this submodule """ data = Config.data cpu = Config.cpu db_file = Config.db_file results = Config.results output_folder = results / 'community_of_co-localized-exons' community_folder = output_folder / 'communities' get_community_file = get_community_file