From f63dde592d2b9f570c4788b06ca747d3ed717107 Mon Sep 17 00:00:00 2001
From: Fontrodona Nicolas <nicolas.fontrodona@ens-lyon.fr>
Date: Tue, 2 Mar 2021 11:27:16 +0100
Subject: [PATCH] src/download_encode_eclip/config.py: add a new variable
'output_gene'
---
src/download_encode_eclip/config.py | 1 +
1 file changed, 1 insertion(+)
diff --git a/src/download_encode_eclip/config.py b/src/download_encode_eclip/config.py
index ada2f7a5..acba0bd2 100644
--- a/src/download_encode_eclip/config.py
+++ b/src/download_encode_eclip/config.py
@@ -16,6 +16,7 @@ class ConfigEncodeClip:
data = Config.data
eclip_file = data / "CLIP_bed" / "experiment_report_2021_1_22_16h_39m.tsv"
output = Config.results / "Encode_clips"
+ output_gene = output / "gene_without_first_last_exons.bed"
encode_website = "https://www.encodeproject.org"
merged_output = Config.results / "Encode_clips_merged"
--
GitLab