From ab3f96215b69ccaeed6bcdc4ff2d1cf5e445743e Mon Sep 17 00:00:00 2001
From: alapendr <audrey.lapendry@ens-lyon.fr>
Date: Fri, 3 Jul 2020 15:20:11 +0200
Subject: [PATCH] __main__.py: main update to launch all the figures
---
src/figures_utils/__main__.py | 11 ++++++++++-
1 file changed, 10 insertions(+), 1 deletion(-)
diff --git a/src/figures_utils/__main__.py b/src/figures_utils/__main__.py
index c24509ba..e15d9e31 100644
--- a/src/figures_utils/__main__.py
+++ b/src/figures_utils/__main__.py
@@ -9,6 +9,9 @@ expected
"""
from . exons_interactions import launch_figures_creation
+from . exons_interactions import get_info_from_database
+import sqlite3
+from .config_figures import Config
def launcher():
@@ -17,7 +20,13 @@ def launcher():
regulated by a splicing factor are more often co-localized than randomly \
expected
"""
- launch_figures_creation()
+ list_sf = get_info_from_database(sqlite3.connect(Config.db_file),
+ """SELECT sf_name
+ FROM cin_project_splicing_lore""")
+ list_sf = list(set(list_sf))
+
+ for sf in list_sf:
+ launch_figures_creation(sf)
launcher()
--
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