From 7a8fc9fbed7ce8b65140544b5f3f5e144ce88c7c Mon Sep 17 00:00:00 2001
From: Fontrodona Nicolas <nicolas.fontrodona@ens-lyon.fr>
Date: Mon, 4 Jan 2021 14:25:39 +0100
Subject: [PATCH]
src/find_interaction_cluster/community_figures/fig_functions.py: fix
get_permutation_mean function
---
src/find_interaction_cluster/community_figures/fig_functions.py | 2 +-
1 file changed, 1 insertion(+), 1 deletion(-)
diff --git a/src/find_interaction_cluster/community_figures/fig_functions.py b/src/find_interaction_cluster/community_figures/fig_functions.py
index 5e754029..09fbfdcf 100644
--- a/src/find_interaction_cluster/community_figures/fig_functions.py
+++ b/src/find_interaction_cluster/community_figures/fig_functions.py
@@ -156,7 +156,7 @@ def get_permutation_mean(df_ctrl: pd.DataFrame,
:return: The list of mean frequencies of `nt` in each subsample
"""
return [
- float(np.mean(df_ctrl[cpnt].sample(size, replace=True).values))
+ float(np.mean(df_ctrl[cpnt].sample(int(size), replace=True).values))
for _ in range(iteration)
]
--
GitLab