From 660b46b9747b6f062d908406ef54321a497bc81d Mon Sep 17 00:00:00 2001
From: Fontrodona Nicolas <nicolas.fontrodona@ens-lyon.fr>
Date: Tue, 4 Mar 2025 14:47:05 +0100
Subject: [PATCH] src/figures_utils/build_rfreq_radarplot.py: small change to
make this work with the script
src/figures_utils/build_refreq_radarplot4_com.py
---
src/figures_utils/build_rfreq_radarplot.py | 11 +++++++----
1 file changed, 7 insertions(+), 4 deletions(-)
diff --git a/src/figures_utils/build_rfreq_radarplot.py b/src/figures_utils/build_rfreq_radarplot.py
index 00e80230..6d80ca76 100644
--- a/src/figures_utils/build_rfreq_radarplot.py
+++ b/src/figures_utils/build_rfreq_radarplot.py
@@ -12,8 +12,8 @@ from typing import List
import lazyparser as lp
import pandas as pd
-import plotly
import plotly.graph_objects as go
+import plotly.io as pio
import seaborn as sns
from matplotlib.colors import to_hex
@@ -25,6 +25,8 @@ from .relative_frequencies_between_communities import (
reordering,
)
+pio.kaleido.scope.mathjax = None
+
def build_rfreq_dataframe(
df_freq: pd.DataFrame,
@@ -102,7 +104,7 @@ def radar_chart(
radialaxis=dict(visible=True, range=[minv, maxv]),
),
)
- plotly.offline.plot(fig, filename=str(outfile), auto_open=False)
+ fig.write_image(outfile, width=800, height=600)
@lp.parse(
@@ -122,7 +124,7 @@ def build_rfreq_figure(
filter_cpnt: List[str] = (),
palette: List[str] = (),
reverse: bool = False,
-) -> None:
+) -> Path:
"""
Build a barplot displaying the relative frequencies between two \
communities
@@ -150,9 +152,10 @@ def build_rfreq_figure(
nf = Path(com_file).stem
outfile = (
Config.radar_plot
- / f"radar_{cpnt_type}_{region}_{nf}_{ncom1}_{ncom2}.html"
+ / f"radar_{cpnt_type}_{region}_{nf}_{ncom1}_{ncom2}.pdf"
)
radar_chart(df_rfreq, outfile, palette)
+ return outfile
if __name__ == "__main__":
--
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