From ddda12b11a4bcbddde44ea32680c415fbcb9997b Mon Sep 17 00:00:00 2001
From: Fontrodona Nicolas <nicolas.fontrodona@ens-lyon.fr>
Date: Mon, 15 Mar 2021 18:13:59 +0100
Subject: [PATCH] src/bed_handler/config.py: add a new variable all_vs_ctcf
---
src/bed_handler/config.py | 1 +
1 file changed, 1 insertion(+)
diff --git a/src/bed_handler/config.py b/src/bed_handler/config.py
index 160a531..f725bc0 100644
--- a/src/bed_handler/config.py
+++ b/src/bed_handler/config.py
@@ -30,6 +30,7 @@ class BedConfig:
gene_bed = base / "data" / "bed" / "gene.bed"
exon_bed = base / "data" / "bed" / "exon.bed"
sipp_vs_ctcf = base / "data" / "Sipp_exon_vs_CTCF.csv"
+ all_vs_ctcf = base / 'data' / 'All_Exons_vs_CTCF.csv'
exons_vs_ctcf = base / "data" / "All_Exons_vs_CTCF.csv"
bed = OutputBed
size = 5000
--
GitLab