diff --git a/src/bed_handler/__main__.py b/src/bed_handler/__main__.py index 79bc3dcd4ee4293f4a9067184a146f0e5f13bf1f..e4a40a9dff1b5fa1d2acb7ca6e46f0b688f9ba95 100644 --- a/src/bed_handler/__main__.py +++ b/src/bed_handler/__main__.py @@ -17,16 +17,18 @@ def launcher(): """ Create the necessary bed file to visualise bigwig file """ - write_regulated_gene_file() - create_filtered_bed() - create_region_bed() - create_bed_ctcf_exon("down", 0, "both") - create_bed_ctcf_exon("down", 1000, "both") - create_bed_ctcf_exon("down", 2000, "both") - create_bed_ctcf_exon("down", 1000, "upstream") - create_bed_ctcf_exon("down", 2000, "upstream") - create_bed_ctcf_exon("down", 1000, "downstream") - create_bed_ctcf_exon("down", 2000, "downstream") + # write_regulated_gene_file() + # create_filtered_bed() + # create_region_bed() + create_bed_ctcf_exon("down", 0, "both", True) + create_bed_ctcf_exon("down", 1000, "both", False) + create_bed_ctcf_exon("down", 2000, "both", False) + create_bed_ctcf_exon("down", 2000, "both", True) + create_bed_ctcf_exon("down", 2000, "both", True, False) + create_bed_ctcf_exon("down", 1000, "upstream", False) + create_bed_ctcf_exon("down", 2000, "upstream", False) + create_bed_ctcf_exon("down", 1000, "downstream", False) + create_bed_ctcf_exon("down", 2000, "downstream", False) launcher()