Commits · master · LBMC / QRG / RAPToR Analysis · GitLab

25 Apr, 2022 5 commits
- Updated tool versions and biorXiv link · fea12f6d
  Romain Bulteau authored Apr 25, 2022
  
  fea12f6d
- Removed old unused plots · cf26ce19
  Romain Bulteau authored Apr 25, 2022
  
  cf26ce19
- Added set.seed for bootstrap interval figure reproducibility · b8d99b52
  Romain Bulteau authored Apr 25, 2022
  
  b8d99b52
- Fixed doubling of WT-mutant subsets · 00a94d21
  Romain Bulteau authored Apr 25, 2022
  
  00a94d21
- Fixed plots for hall2010 analysis · 7ee5825b
  Romain Bulteau authored Apr 25, 2022
  
  7ee5825b
02 Mar, 2022 25 commits
- Added html files to gitignore · 56d11344
  Romain Bulteau authored Mar 02, 2022
  
  56d11344
- Added new references · 6d3482d1
  Romain Bulteau authored Mar 02, 2022
  
  6d3482d1
- cleaned up file · c3ab42bb
  Romain Bulteau authored Mar 02, 2022
  
  c3ab42bb
- Added the log axis parameter to pretty tick function · b7d50e45
  Romain Bulteau authored Mar 02, 2022
  
  b7d50e45
- Added script for bootstrap CI analysis · cfbbd32f
  Romain Bulteau authored Mar 02, 2022
  
  cfbbd32f
- Added script for loading mouse microarray probe ids (affy_mouse430_2) · 8c6f3f3d
  Romain Bulteau authored Mar 02, 2022
  
  8c6f3f3d
- Added example of staging without interpolation of reference · 87213609
  Romain Bulteau authored Mar 02, 2022
  
  87213609
- Added spearman correlation to plots · 2bb09fad
  Romain Bulteau authored Mar 02, 2022
  
  2bb09fad
- Added script for Cow/Human cross-species staging · e5f6491a
  Romain Bulteau authored Mar 02, 2022
  
  e5f6491a
- Added script for staging C. elegans and mouse hippocampus aging within dataset · ab39a05d
  Romain Bulteau authored Mar 02, 2022
  
  ab39a05d
- Added script for staging aging human brain tissue · 3bb2d838
  Romain Bulteau authored Mar 02, 2022
  
  3bb2d838
- Added script for staging aging D. melanogaster · 13237156
  Romain Bulteau authored Mar 02, 2022
  
  13237156
- Added script for staging aging C. elegans · 68647274
  Romain Bulteau authored Mar 02, 2022
  
  68647274
- Added script for single-cell staging · 4b9d16e7
  Romain Bulteau authored Mar 02, 2022
  
  4b9d16e7
- Added pletcher2002 pheno data · 9a8e5d72
  Romain Bulteau authored Mar 02, 2022
  
  9a8e5d72
- Added pletcher2002 expression data · 68385059
  Romain Bulteau authored Mar 02, 2022
  
  68385059
- Added human/cow ortholog loading script · 316101a7
  Romain Bulteau authored Mar 02, 2022
  
  316101a7
- Added microarray probeset loading script (hugene1) · e5e5d086
  Romain Bulteau authored Mar 02, 2022
  
  e5e5d086
- Added dataset loading script for vassena2011 · ed2e8e84
  Romain Bulteau authored Mar 02, 2022
  
  ed2e8e84
- Added dataset loading script for dscuthbert2021 · 57628ab0
  Romain Bulteau authored Mar 02, 2022
  
  57628ab0
- Added dataset loading script for wang2014 · 143d69a8
  Romain Bulteau authored Mar 02, 2022
  
  143d69a8
- Added dataset loading script for chen2016 · bf9fd860
  Romain Bulteau authored Mar 02, 2022
  
  bf9fd860
- Added dataset loading script for deng2014 · 3fce0b57
  Romain Bulteau authored Mar 02, 2022
  
  3fce0b57
- removed deng2014 dataset from gitignore · 1fa84df8
  Romain Bulteau authored Mar 02, 2022
  
  1fa84df8
- Added dataset loading script for petropoulos2016 · 80fcc89e
  Romain Bulteau authored Mar 02, 2022
  
  80fcc89e
04 Feb, 2022 3 commits
- Started single-cell staging examples · f1954565
  Romain Bulteau authored Feb 04, 2022
  
  f1954565
- Added component examples for 'intelligible dynamics · adf8a7b4
  Romain Bulteau authored Feb 04, 2022
  
  adf8a7b4
- Added RMSE computation analysis · 49bebd7f
  Romain Bulteau authored Feb 04, 2022
  
  49bebd7f
14 Dec, 2021 5 commits
- Added rho and switched R2 to value of upper jaw only · 9e32c231
  Romain Bulteau authored Dec 14, 2021
  
  9e32c231
- Added spearman cor 1 ref timepoints to ae.v.chron plot · 70a967eb
  Romain Bulteau authored Dec 14, 2021
  
  70a967eb
- Added spearman cor 1 ref timepoints to ae.v.chron plot · 9272c716
  Romain Bulteau authored Dec 14, 2021
  
  9272c716
- Added spearman cor & ref. timepoints to ae.v.chron plot · ec8743f1
  Romain Bulteau authored Dec 14, 2021
  
  ec8743f1
- Added slope, spearman cor. and ref timepoints to ae.v.chron plot · a9cdfbfb
  Romain Bulteau authored Dec 14, 2021
  
  a9cdfbfb
10 Dec, 2021 2 commits
- Added ds loading for Dmel aging · b6e72b4e
  Romain Bulteau authored Dec 10, 2021
  
  b6e72b4e
- Cleaned up ds loading for Cel aging · 58665fa4
  Romain Bulteau authored Dec 10, 2021
  
  58665fa4