profiles { docker { docker.temp = 'auto' docker.enabled = true process { withName: bam_to_bigwig { container = "deeptools:3.0.2" } } } psmn { process{ withName: bam_to_bigwig { beforeScript = "source /usr/share/lmod/lmod/init/bash; module use ~/privatemodules" module = "deepTools/3.0.2" executor = "sge" clusterOptions = "-m e -cwd -V" memory = "20GB" time = "12h" queue = 'monointeldeb128' } } } }