From fea9a9ee89ae5d268a3daca524b4e5eb41cf4f02 Mon Sep 17 00:00:00 2001
From: Laurent Modolo <laurent.modolo@ens-lyon.fr>
Date: Fri, 12 Apr 2019 14:36:16 +0200
Subject: [PATCH] umi_tools: add docker files

---
 src/docker_modules/umi_tools/0.5.4/Dockerfile     |  2 ++
 src/docker_modules/umi_tools/0.5.4/docker_init.sh |  2 ++
 src/docker_modules/umi_tools/1.0.0/Dockerfile     | 13 +++++++++++++
 src/docker_modules/umi_tools/1.0.0/docker_init.sh |  2 ++
 4 files changed, 19 insertions(+)
 create mode 100644 src/docker_modules/umi_tools/0.5.4/Dockerfile
 create mode 100755 src/docker_modules/umi_tools/0.5.4/docker_init.sh
 create mode 100644 src/docker_modules/umi_tools/1.0.0/Dockerfile
 create mode 100755 src/docker_modules/umi_tools/1.0.0/docker_init.sh

diff --git a/src/docker_modules/umi_tools/0.5.4/Dockerfile b/src/docker_modules/umi_tools/0.5.4/Dockerfile
new file mode 100644
index 00000000..81c4cc8c
--- /dev/null
+++ b/src/docker_modules/umi_tools/0.5.4/Dockerfile
@@ -0,0 +1,2 @@
+FROM quay.io/biocontainers/umi_tools:0.5.4--py27hdd9f355_1
+MAINTAINER Rémi SERAPHIN
diff --git a/src/docker_modules/umi_tools/0.5.4/docker_init.sh b/src/docker_modules/umi_tools/0.5.4/docker_init.sh
new file mode 100755
index 00000000..8f0c4ea9
--- /dev/null
+++ b/src/docker_modules/umi_tools/0.5.4/docker_init.sh
@@ -0,0 +1,2 @@
+#!/bin/sh
+docker build src/docker_modules/umi_tools/1.0.0/ -t 'umi_tools:1.0.0'
diff --git a/src/docker_modules/umi_tools/1.0.0/Dockerfile b/src/docker_modules/umi_tools/1.0.0/Dockerfile
new file mode 100644
index 00000000..877261ac
--- /dev/null
+++ b/src/docker_modules/umi_tools/1.0.0/Dockerfile
@@ -0,0 +1,13 @@
+FROM debian:stretch
+MAINTAINER Rémi SERAPHIN
+
+ENV UMI_TOOLS_VERSION=1.0.0
+ENV PACKAGES bash \
+             python3 \
+             python3-pip \
+             gcc
+
+RUN apt update && \
+    apt install ${PACKAGES} -y
+
+RUN pip3 install umi_tools==${UMI_TOOLS_VERSION}
diff --git a/src/docker_modules/umi_tools/1.0.0/docker_init.sh b/src/docker_modules/umi_tools/1.0.0/docker_init.sh
new file mode 100755
index 00000000..8f0c4ea9
--- /dev/null
+++ b/src/docker_modules/umi_tools/1.0.0/docker_init.sh
@@ -0,0 +1,2 @@
+#!/bin/sh
+docker build src/docker_modules/umi_tools/1.0.0/ -t 'umi_tools:1.0.0'
-- 
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