From f7dad66d516dd0e050e8ffe89761d146e36fc7fc Mon Sep 17 00:00:00 2001
From: Laurent Modolo <laurent.modolo@ens-lyon.fr>
Date: Wed, 7 Jul 2021 12:03:59 +0200
Subject: [PATCH] kb: enable infer tr and gn in t2g.py
---
src/.docker_modules/kb/0.26.0/t2g.py | 4 ++--
1 file changed, 2 insertions(+), 2 deletions(-)
diff --git a/src/.docker_modules/kb/0.26.0/t2g.py b/src/.docker_modules/kb/0.26.0/t2g.py
index 96421e4b..c27cdfa9 100755
--- a/src/.docker_modules/kb/0.26.0/t2g.py
+++ b/src/.docker_modules/kb/0.26.0/t2g.py
@@ -26,8 +26,8 @@ if __name__ == "__main__":
dbfn=":memory:",
force=True,
merge_strategy="merge",
- disable_infer_transcripts=True,
- disable_infer_genes=True
+ disable_infer_transcripts=False,
+ disable_infer_genes=False
)
with open("t2g.txt", "w") as t2g:
for gene in db.all_features():
--
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