From f24f02d71e8609c04d8e2c4fa0694b10ba9e755a Mon Sep 17 00:00:00 2001
From: Laurent Modolo <laurent.modolo@ens-lyon.fr>
Date: Mon, 25 Oct 2021 17:02:00 +0200
Subject: [PATCH] danspo: rename channel bedgraph -> bg
---
src/nf_modules/danpos/main.nf | 10 +++++-----
1 file changed, 5 insertions(+), 5 deletions(-)
diff --git a/src/nf_modules/danpos/main.nf b/src/nf_modules/danpos/main.nf
index 3f33cd9d..180ae72a 100644
--- a/src/nf_modules/danpos/main.nf
+++ b/src/nf_modules/danpos/main.nf
@@ -21,7 +21,7 @@ workflow dpos_bam_bg {
wig2_to_bedgraph2(fasta, dpos_bam.out.wig)
emit:
- bedgraph = wig2_to_bedgraph2.out.bedgraph
+ bg = wig2_to_bedgraph2.out.bg
wig = dpos_bam.out.wig
bed = dpos_bam.out.bed
}
@@ -82,7 +82,7 @@ workflow dpos_bw {
wig_to_bedgraph(fasta, dpos_wig.out.wig)
emit:
- bedgraph = wig_to_bedgraph.out.bedgraph
+ bg = wig_to_bedgraph.out.bg
wig = dpos_wig.out.wig
bed = dpos_wig.out.bed
}
@@ -147,7 +147,7 @@ workflow dwig_bwvsbw {
wig_to_bedgraph(fasta, dpos_wigvswig.out.wig)
emit:
- bedgraph = wig_to_bedgraph.out.bedgraph
+ bg = wig_to_bedgraph.out.bg
wig = dpeak_wig.out.wig
bed = dpeak_wig.out.bed
}
@@ -260,7 +260,7 @@ workflow dpeak_bw {
wig2_to_bedgraph2(fasta, dpeak_wig.out.wig)
emit:
- bedgraph = wig2_to_bedgraph2.out.bedgraph
+ bg = wig2_to_bedgraph2.out.bg
wig = dpeak_wig.out.wig
bed = dpeak_wig.out.bed
}
@@ -328,7 +328,7 @@ workflow dpeak_bwvsbw {
wig2_to_bedgraph2(fasta, dpeak_wigvswig.out.wig)
emit:
- bedgraph = wig2_to_bedgraph2.out.bedgraph
+ bg = wig2_to_bedgraph2.out.bg
wig = dpeak_wig.out.wig
bed = dpeak_wig.out.bed
}
--
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