diff --git a/src/docker_modules/HTSeq/0.11.2/Dockerfile b/src/docker_modules/HTSeq/0.11.2/Dockerfile new file mode 100644 index 0000000000000000000000000000000000000000..779729a17b9a9f3b2fbadcd2efdf1c6196275c98 --- /dev/null +++ b/src/docker_modules/HTSeq/0.11.2/Dockerfile @@ -0,0 +1,18 @@ + +FROM ubuntu:18.04 +MAINTAINER Laurent Modolo + +ENV HTSEQ_VERSION=0.11.2 +ENV PACKAGES build-essential=12.4* \ + python3-pip=9.0.1* \ + python3-setuptools=39.0.1* \ + python3-dev=3.6.7* \ + python3-wheel=0.30.0* + +RUN apt-get update && \ + apt-get install -y --no-install-recommends ${PACKAGES} && \ + apt-get clean + +RUN pip3 install numpy==1.14.3 +RUN pip3 install pysam==0.15.0 +RUN pip3 install HTSeq==${HTSEQ_VERSION} diff --git a/src/docker_modules/HTSeq/0.11.2/docker_init.sh b/src/docker_modules/HTSeq/0.11.2/docker_init.sh new file mode 100644 index 0000000000000000000000000000000000000000..b46f01de71ede2fa99923f609cc98d96994a6bf6 --- /dev/null +++ b/src/docker_modules/HTSeq/0.11.2/docker_init.sh @@ -0,0 +1,2 @@ +#!/bin/sh +docker build src/docker_modules/HTSeq/0.11.2 -t 'htseq:0.11.2'