diff --git a/src/nf_modules/danpos/main.nf b/src/nf_modules/danpos/main.nf index 981ac496547df7248990050de34f3e5ea2b76e54..e5c72cd41304549091c38d3e5bead7056a12c3dd 100644 --- a/src/nf_modules/danpos/main.nf +++ b/src/nf_modules/danpos/main.nf @@ -31,7 +31,7 @@ process dpos_bam { label "big_mem_mono_cpus" tag "$file_id" if (params.dpos_out != "") { - publishDir "results/${params.dpos_out}", mode: 'copy' + publishDir "results/${params.dpos_out}", mode: 'copy', overwrite: true } input: @@ -93,7 +93,7 @@ process dpos_wig { label "big_mem_mono_cpus" tag "$file_id" if (params.dpos_out != "") { - publishDir "results/${params.dpos_out}", mode: 'copy' + publishDir "results/${params.dpos_out}", mode: 'copy', overwrite: true } input: @@ -159,7 +159,7 @@ process dpos_wigvswig { label "big_mem_mono_cpus" tag "$file_id" if (params.dpos_out != "") { - publishDir "results/${params.dpos_out}", mode: 'copy' + publishDir "results/${params.dpos_out}", mode: 'copy', overwrite: true } input: @@ -210,7 +210,7 @@ process dpeak_bam { label "big_mem_mono_cpus" tag "$file_id" if (params.dpeak_out != "") { - publishDir "results/${params.dpeak_out}", mode: 'copy' + publishDir "results/${params.dpeak_out}", mode: 'copy', overwrite: true } input: @@ -275,7 +275,7 @@ process dpeak_wig { label "big_mem_mono_cpus" tag "$file_id" if (params.dpeak_out != "") { - publishDir "results/${params.dpeak_out}", mode: 'copy' + publishDir "results/${params.dpeak_out}", mode: 'copy', overwrite: true } input: @@ -344,7 +344,7 @@ process dpeak_wigvswig { label "big_mem_mono_cpus" tag "$file_id" if (params.dpeak_out != "") { - publishDir "results/${params.dpeak_out}", mode: 'copy' + publishDir "results/${params.dpeak_out}", mode: 'copy', overwrite: true } input: