diff --git a/src/nf_modules/gffread/main.nf b/src/nf_modules/gffread/main.nf index 6b673bb128143d810ca4cf6a5c09767a1be0b524..dcc4bf5e2ffa11154c2e104e1eda4bb84aa160ce 100644 --- a/src/nf_modules/gffread/main.nf +++ b/src/nf_modules/gffread/main.nf @@ -25,6 +25,6 @@ process gffread { file_prefix = file_id } """ - gffread ${gtf} -g ${fasta} -x -o ${file_prefix}.fasta + gffread ${gtf} -g ${fasta} -M -x ${file_prefix}.fasta """ -} \ No newline at end of file +}