From c8fc7774d895944e0eaf81a241accd96d0b5679e Mon Sep 17 00:00:00 2001 From: Laurent Modolo <laurent@modolo.fr> Date: Tue, 5 Nov 2019 11:19:50 +0100 Subject: [PATCH] README.md: add list of nextflow projects --- README.md | 4 ++++ doc/nf_projects.md | 20 ++++++++++++++++++++ 2 files changed, 24 insertions(+) create mode 100644 doc/nf_projects.md diff --git a/README.md b/README.md index 3b2c8d6b..795d3391 100644 --- a/README.md +++ b/README.md @@ -19,6 +19,10 @@ These instructions will get you a copy of the project up and running on your loc [The list of available tools.](doc/available_tools.md) +## Projects using nextflow + +[A list of projects using nextflow at the LBMC.](doc/nf_projects.md) + ## Contributing Please read [CONTRIBUTING.md](CONTRIBUTING.md) for details on our code of conduct, and the process for submitting pull requests to us. diff --git a/doc/nf_projects.md b/doc/nf_projects.md new file mode 100644 index 00000000..cee6deaf --- /dev/null +++ b/doc/nf_projects.md @@ -0,0 +1,20 @@ +## Projects using nextflow + +### RNASeq + +- [https://_https://gitlab.biologie.ens-lyon.fr/gylab/salmoninyeast](https://_https://gitlab.biologie.ens-lyon.fr/gylab/salmoninyeast) +- [https://github.com/LBMC/readthroughpombe](https://github.com/LBMC/readthroughpombe) +- [https://_https://gitlab.biologie.ens-lyon.fr/vvanoost/nextflow](https://_https://gitlab.biologie.ens-lyon.fr/vvanoost/nextflow) + +### single-cell RNA_-Seq + +- [https://gitlab.com/LBMC_UMR5239/sbdm/mars-seq](https://gitlab.com/LBMC_UMR5239/sbdm/mars-seq) + +### DNASeq + +- [https://github.com/LBMC/ChrSexebelari](https://github.com/LBMC/ChrSexebelari) + +### Chip-Seq + +- [https://gitlab.biologie.ens-lyon.fr/Auboeuf/ChIP-seq](https://gitlab.biologie.ens-lyon.fr/Auboeuf/ChIP-seq) + -- GitLab