diff --git a/README.md b/README.md index 3b2c8d6b7f8cdd631a23feeff0db9f60be0d62df..795d33917367b7fd4381a818067d24e4d3b979e6 100644 --- a/README.md +++ b/README.md @@ -19,6 +19,10 @@ These instructions will get you a copy of the project up and running on your loc [The list of available tools.](doc/available_tools.md) +## Projects using nextflow + +[A list of projects using nextflow at the LBMC.](doc/nf_projects.md) + ## Contributing Please read [CONTRIBUTING.md](CONTRIBUTING.md) for details on our code of conduct, and the process for submitting pull requests to us. diff --git a/doc/nf_projects.md b/doc/nf_projects.md new file mode 100644 index 0000000000000000000000000000000000000000..cee6deaffa8033703ac26d7493daad2a7626c2ad --- /dev/null +++ b/doc/nf_projects.md @@ -0,0 +1,20 @@ +## Projects using nextflow + +### RNASeq + +- [https://_https://gitlab.biologie.ens-lyon.fr/gylab/salmoninyeast](https://_https://gitlab.biologie.ens-lyon.fr/gylab/salmoninyeast) +- [https://github.com/LBMC/readthroughpombe](https://github.com/LBMC/readthroughpombe) +- [https://_https://gitlab.biologie.ens-lyon.fr/vvanoost/nextflow](https://_https://gitlab.biologie.ens-lyon.fr/vvanoost/nextflow) + +### single-cell RNA_-Seq + +- [https://gitlab.com/LBMC_UMR5239/sbdm/mars-seq](https://gitlab.com/LBMC_UMR5239/sbdm/mars-seq) + +### DNASeq + +- [https://github.com/LBMC/ChrSexebelari](https://github.com/LBMC/ChrSexebelari) + +### Chip-Seq + +- [https://gitlab.biologie.ens-lyon.fr/Auboeuf/ChIP-seq](https://gitlab.biologie.ens-lyon.fr/Auboeuf/ChIP-seq) +