From c05b8c6a254142f7489ebe7da8324a7dc7c0d681 Mon Sep 17 00:00:00 2001
From: Laurent Modolo <laurent.modolo@ens-lyon.fr>
Date: Fri, 4 Jun 2021 10:23:52 +0200
Subject: [PATCH] bowtie2: fix switch :67
---
src/nf_modules/bowtie2/main.nf | 2 +-
1 file changed, 1 insertion(+), 1 deletion(-)
diff --git a/src/nf_modules/bowtie2/main.nf b/src/nf_modules/bowtie2/main.nf
index 20f66eb1..4a670f17 100644
--- a/src/nf_modules/bowtie2/main.nf
+++ b/src/nf_modules/bowtie2/main.nf
@@ -64,7 +64,7 @@ process mapping_fastq {
file_prefix = file_id.values()[0]
break
default:
- file_id
+ file_prefix = file_id
break
}
--
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