From bfa37a10c2f9381171dea8f2ba612a235e629860 Mon Sep 17 00:00:00 2001
From: Laurent Modolo <laurent.modolo@ens-lyon.fr>
Date: Fri, 20 Aug 2021 10:48:49 +0200
Subject: [PATCH] emase-zero.nf: fix typo :47
---
src/nf_modules/emase-zero/main.nf | 2 +-
1 file changed, 1 insertion(+), 1 deletion(-)
diff --git a/src/nf_modules/emase-zero/main.nf b/src/nf_modules/emase-zero/main.nf
index 1e7b659b..6c8282ab 100644
--- a/src/nf_modules/emase-zero/main.nf
+++ b/src/nf_modules/emase-zero/main.nf
@@ -44,7 +44,7 @@ process emase {
script:
"""
grep ">" ${fasta} | sed 's/>//' > tr_list.txt
-grep -Fw -f tr_list ${gene_to_transcript} > gene_to_transcript.txt
+grep -Fw -f tr_list.txt ${gene_to_transcript} > gene_to_transcript.txt
emase-zero ${params.count} \
-o ${bin.simpleName}.quantified \
-l ${transcript_length} \
--
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