diff --git a/src/nf_modules/macs2/peak_calling.config b/src/nf_modules/macs2/peak_calling.config index fe712a6a5fc2036cfd236266228a542d41bcfa9d..2eaed2e7160d91380c5ad08d18ec027c60338fdf 100644 --- a/src/nf_modules/macs2/peak_calling.config +++ b/src/nf_modules/macs2/peak_calling.config @@ -33,4 +33,19 @@ profiles { } } } + ccin2p3 { + process{ + withName: peak_calling { + beforeScript = "PATH=/sps/lbmc/common/nextflow/src/singularity_modules/macs2/2.1.2/:/usr/bin:$PATH" + scratch = true + stageInMode = "copy" + stageOutMode = "rsync" + executor = "sge" + clusterOptions = "-P P_lbmc -l os=cl7 -l sps=1 -r n" + cpus = 1 + memory = "10GB" + time = "24h" + } + } + } }