From a92d2e0251df06005f3d437fd93dc64133380727 Mon Sep 17 00:00:00 2001
From: Laurent Modolo <laurent.modolo@ens-lyon.fr>
Date: Tue, 2 Nov 2021 10:42:55 +0100
Subject: [PATCH] mutliqc.nf: fix flatten procedure
---
src/nf_modules/multiqc/main.nf | 8 +++++---
1 file changed, 5 insertions(+), 3 deletions(-)
diff --git a/src/nf_modules/multiqc/main.nf b/src/nf_modules/multiqc/main.nf
index f33386d2..fef35b50 100644
--- a/src/nf_modules/multiqc/main.nf
+++ b/src/nf_modules/multiqc/main.nf
@@ -16,7 +16,7 @@ multiqc(
report_b,
report_c,
report_d
- ).collect()
+ )
)
*/
@@ -29,8 +29,9 @@ workflow multiqc {
take:
report
main:
- report.map{
- if (it instanceof List){
+ report
+ .map{it ->
+ if (it.size() > 1){
it[1]
} else {
it
@@ -38,6 +39,7 @@ workflow multiqc {
}
.flatten()
.unique()
+ .view()
.set { report_cleaned }
multiqc_default(report_cleaned.collect())
--
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