From a8c8f525b7411987d050e03ae79f4cf59648bfe3 Mon Sep 17 00:00:00 2001
From: Laurent Modolo <laurent.modolo@ens-lyon.fr>
Date: Mon, 23 Aug 2021 11:01:29 +0200
Subject: [PATCH] emase-zero: replace file_prefix by file_id
---
src/nf_modules/emase-zero/main.nf | 4 ++--
1 file changed, 2 insertions(+), 2 deletions(-)
diff --git a/src/nf_modules/emase-zero/main.nf b/src/nf_modules/emase-zero/main.nf
index 93f80518..5f4f5335 100644
--- a/src/nf_modules/emase-zero/main.nf
+++ b/src/nf_modules/emase-zero/main.nf
@@ -50,9 +50,9 @@ emase-zero ${params.count} \
-o ${bin.simpleName}.quantified \
-l ${transcript_length} \
-g gene_to_transcript.txt \
- ${bin} 2> ${file_prefix}_emase-zero_repport.txt
+ ${bin} 2> ${file_id}_emase-zero_repport.txt
-if grep -q "ERROR" ${file_prefix}_emase-zero_repport.txt; then
+if grep -q "ERROR" ${file_id}_emase-zero_repport.txt; then
exit 1
fi
--
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