From 9fe7ac40fd806cc8fe148cb4ae667388b55df89b Mon Sep 17 00:00:00 2001
From: Laurent Modolo <laurent.modolo@ens-lyon.fr>
Date: Mon, 4 Mar 2019 15:10:05 +0100
Subject: [PATCH] deeptools: add singularity files
---
.../deeptools/3.0.2/build.sh | 3 +++
.../deeptools/3.0.2/deeptools.def | 27 +++++++++++++++++++
.../deeptools/3.1.1/build.sh | 3 +++
.../deeptools/3.1.1/deeptools.def | 27 +++++++++++++++++++
4 files changed, 60 insertions(+)
create mode 100755 src/singularity_modules/deeptools/3.0.2/build.sh
create mode 100644 src/singularity_modules/deeptools/3.0.2/deeptools.def
create mode 100755 src/singularity_modules/deeptools/3.1.1/build.sh
create mode 100644 src/singularity_modules/deeptools/3.1.1/deeptools.def
diff --git a/src/singularity_modules/deeptools/3.0.2/build.sh b/src/singularity_modules/deeptools/3.0.2/build.sh
new file mode 100755
index 00000000..b9b83757
--- /dev/null
+++ b/src/singularity_modules/deeptools/3.0.2/build.sh
@@ -0,0 +1,3 @@
+#/bin/sh
+sudo singularity build --force bin/deeptools:3.0.2.sif src/singularity_modules/deeptools/3.0.2/deeptools.def
+singularity sign bin/deeptools:3.0.2.sif
diff --git a/src/singularity_modules/deeptools/3.0.2/deeptools.def b/src/singularity_modules/deeptools/3.0.2/deeptools.def
new file mode 100644
index 00000000..dc8fbdca
--- /dev/null
+++ b/src/singularity_modules/deeptools/3.0.2/deeptools.def
@@ -0,0 +1,27 @@
+Bootstrap: docker
+From: debian:stretch
+
+%labels
+MAINTAINER Laurent Modolo
+
+%post
+DEEPTOOLS_VERSION=3.0.2
+PACKAGES="build-essential \
+ python3-pip \
+ python3-setuptools \
+ python3-dev \
+ python3-wheel \
+ zlib1g-dev \
+ libcurl4-gnutls-dev"
+
+apt-get update && \
+apt-get install -y --no-install-recommends ${PACKAGES} && \
+apt-get clean
+
+pip3 install deeptools==${DEEPTOOLS_VERSION}
+
+%environment
+export DEEPTOOLS_VERSION=3.0.2
+
+%runscript
+exec /bin/bash "$@"
diff --git a/src/singularity_modules/deeptools/3.1.1/build.sh b/src/singularity_modules/deeptools/3.1.1/build.sh
new file mode 100755
index 00000000..07c3840c
--- /dev/null
+++ b/src/singularity_modules/deeptools/3.1.1/build.sh
@@ -0,0 +1,3 @@
+#/bin/sh
+sudo singularity build --force bin/deeptools:3.1.1.sif src/singularity_modules/deeptools/3.1.1/deeptools.def
+singularity sign bin/deeptools:3.1.1.sif
diff --git a/src/singularity_modules/deeptools/3.1.1/deeptools.def b/src/singularity_modules/deeptools/3.1.1/deeptools.def
new file mode 100644
index 00000000..366b6218
--- /dev/null
+++ b/src/singularity_modules/deeptools/3.1.1/deeptools.def
@@ -0,0 +1,27 @@
+Bootstrap: docker
+From: debian:stretch
+
+%labels
+MAINTAINER Laurent Modolo
+
+%post
+DEEPTOOLS_VERSION=3.1.1
+PACKAGES="build-essential \
+ python3-pip \
+ python3-setuptools \
+ python3-dev \
+ python3-wheel \
+ zlib1g-dev \
+ libcurl4-gnutls-dev"
+
+apt-get update && \
+apt-get install -y --no-install-recommends ${PACKAGES} && \
+apt-get clean
+
+pip3 install deeptools==${DEEPTOOLS_VERSION}
+
+%environment
+export DEEPTOOLS_VERSION=3.0.2
+
+%runscript
+exec /bin/bash "$@"
--
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