diff --git a/src/nextflow.config b/src/nextflow.config index 05a44103d10634c594695b799d6cadc2884514b5..859be7adc4e3fd49257bb1d9ed05e85bf9681adc 100644 --- a/src/nextflow.config +++ b/src/nextflow.config @@ -35,6 +35,27 @@ profiles { } } } + podman { + podman.enabled = true + process { + errorStrategy = 'finish' + memory = '16GB' + withLabel: big_mem_mono_cpus { + cpus = 1 + } + withLabel: big_mem_multi_cpus { + cpus = 4 + } + withLabel: small_mem_mono_cpus { + cpus = 1 + memory = '2GB' + } + withLabel: small_mem_multi_cpus { + cpus = 4 + memory = '2GB' + } + } + } singularity { singularity.enabled = true singularity.cacheDir = "./bin/"