From 86073f758de56fe98784ace5873001a397136e68 Mon Sep 17 00:00:00 2001
From: Laurent Modolo <laurent.modolo@ens-lyon.fr>
Date: Tue, 5 Oct 2021 17:11:40 +0200
Subject: [PATCH] danpos: remove trace of DSL1
---
src/nf_modules/danpos/main.nf | 16 ++++++++--------
1 file changed, 8 insertions(+), 8 deletions(-)
diff --git a/src/nf_modules/danpos/main.nf b/src/nf_modules/danpos/main.nf
index d2b94109..15e17580 100644
--- a/src/nf_modules/danpos/main.nf
+++ b/src/nf_modules/danpos/main.nf
@@ -21,7 +21,7 @@ process dpos_bam {
tuple val(file_id), path(bam_ip), path(bam_wce)
output:
- tuple file_id, "${file_prefix}/pooled/*.wig" into wig
+ tuple val(file_id), path("${file_prefix}/pooled/*.wig"), emit: wig
tuple val(file_id), path("${file_prefix}"), emit: folder
script:
@@ -75,8 +75,8 @@ process dpos_wig {
tuple val(file_id), path(wig_ip), path(wig_wce)
output:
- tuple file_id, "${file_prefix}/pooled/*.wig" into wig
- tuple val(file_id), path("${file_prefix}"), emit: folder
+ tuple val(file_id), path("${file_prefix}/pooled/*.wig"), emit: wig
+ tuple val(file_id), path("${file_prefix}"), emit: folder
script:
@@ -135,8 +135,8 @@ process dpos_wigvswig {
tuple val(file_id_b), path(wig_ip_b), path(wig_wce_b)
output:
- tuple file_id_a, "${file_prefix}/pooled/*.wig" into wig
- tuple val(file_id_a), path("${file_prefix}"), emit: folder
+ tuple val(file_id), path("${file_prefix}/pooled/*.wig"), emit: wig
+ tuple val(file_id_a), path("${file_prefix}"), emit: folder
script:
@@ -181,7 +181,7 @@ process dpeak_bam {
tuple val(file_id), path(bam_ip), path(bam_wce)
output:
- tuple file_id, "${file_prefix}/pooled/*.wig" into wig
+ tuple val(file_id), path("${file_prefix}/pooled/*.wig"), emit: wig
tuple val(file_id), path("${file_prefix}"), emit: folder
script:
@@ -236,7 +236,7 @@ process dpeak_wig {
tuple val(file_id), path(wig_ip), path(wig_wce)
output:
- tuple file_id, "${file_prefix}/pooled/*.wig" into wig
+ tuple val(file_id), path("${file_prefix}/pooled/*.wig"), emit: wig
tuple val(file_id), path("${file_prefix}"), emit: folder
script:
@@ -297,7 +297,7 @@ process dpeak_wigvswig {
tuple val(file_id_b), path(wig_ip_b), path(wig_wce_b)
output:
- tuple file_id_a, "${file_prefix}/pooled/*.wig" into wig
+ tuple val(file_id_a), path("${file_prefix}/pooled/*.wig"), emit: wig
tuple val(file_id_a), path("${file_prefix}"), emit: folder
script:
--
GitLab