diff --git a/src/nf_modules/danpos/main.nf b/src/nf_modules/danpos/main.nf index d2b94109ce3105de8d5771be12195a223e523cf7..15e175807b4f2d3a37498303ecffdea8959506f3 100644 --- a/src/nf_modules/danpos/main.nf +++ b/src/nf_modules/danpos/main.nf @@ -21,7 +21,7 @@ process dpos_bam { tuple val(file_id), path(bam_ip), path(bam_wce) output: - tuple file_id, "${file_prefix}/pooled/*.wig" into wig + tuple val(file_id), path("${file_prefix}/pooled/*.wig"), emit: wig tuple val(file_id), path("${file_prefix}"), emit: folder script: @@ -75,8 +75,8 @@ process dpos_wig { tuple val(file_id), path(wig_ip), path(wig_wce) output: - tuple file_id, "${file_prefix}/pooled/*.wig" into wig - tuple val(file_id), path("${file_prefix}"), emit: folder + tuple val(file_id), path("${file_prefix}/pooled/*.wig"), emit: wig + tuple val(file_id), path("${file_prefix}"), emit: folder script: @@ -135,8 +135,8 @@ process dpos_wigvswig { tuple val(file_id_b), path(wig_ip_b), path(wig_wce_b) output: - tuple file_id_a, "${file_prefix}/pooled/*.wig" into wig - tuple val(file_id_a), path("${file_prefix}"), emit: folder + tuple val(file_id), path("${file_prefix}/pooled/*.wig"), emit: wig + tuple val(file_id_a), path("${file_prefix}"), emit: folder script: @@ -181,7 +181,7 @@ process dpeak_bam { tuple val(file_id), path(bam_ip), path(bam_wce) output: - tuple file_id, "${file_prefix}/pooled/*.wig" into wig + tuple val(file_id), path("${file_prefix}/pooled/*.wig"), emit: wig tuple val(file_id), path("${file_prefix}"), emit: folder script: @@ -236,7 +236,7 @@ process dpeak_wig { tuple val(file_id), path(wig_ip), path(wig_wce) output: - tuple file_id, "${file_prefix}/pooled/*.wig" into wig + tuple val(file_id), path("${file_prefix}/pooled/*.wig"), emit: wig tuple val(file_id), path("${file_prefix}"), emit: folder script: @@ -297,7 +297,7 @@ process dpeak_wigvswig { tuple val(file_id_b), path(wig_ip_b), path(wig_wce_b) output: - tuple file_id_a, "${file_prefix}/pooled/*.wig" into wig + tuple val(file_id_a), path("${file_prefix}/pooled/*.wig"), emit: wig tuple val(file_id_a), path("${file_prefix}"), emit: folder script: