diff --git a/src/nf_modules/emase-zero/main.nf b/src/nf_modules/emase-zero/main.nf
index 5ec6e81288bbd4256e63cde4d577b5482eab015f..1df64020554d1204ed3b3dd980603606861a3d3b 100644
--- a/src/nf_modules/emase-zero/main.nf
+++ b/src/nf_modules/emase-zero/main.nf
@@ -43,9 +43,9 @@ process emase {
   script:
 """
 emase-zero ${params.count} \
-  -b ${bin} \
   -o ${bin.simpleName}.quantified \
   -l ${transcript_length} \
-  -g ${transcript_to_gene}
+  -g ${transcript_to_gene} \
+  ${bin}
 """
 }
\ No newline at end of file