From 38c12624a3b41e2d464f29178fd1e7d2800bac3a Mon Sep 17 00:00:00 2001
From: Laurent Modolo <laurent.modolo@ens-lyon.fr>
Date: Thu, 21 Oct 2021 15:40:49 +0200
Subject: [PATCH] danpos: rm wce wig from output
---
src/nf_modules/danpos/main.nf | 8 ++++----
1 file changed, 4 insertions(+), 4 deletions(-)
diff --git a/src/nf_modules/danpos/main.nf b/src/nf_modules/danpos/main.nf
index e78d35c5..dfb00d66 100644
--- a/src/nf_modules/danpos/main.nf
+++ b/src/nf_modules/danpos/main.nf
@@ -38,7 +38,7 @@ process dpos_bam {
tuple val(file_id), path(bam_ip), path(bam_wce)
output:
- tuple val(file_id), path("${file_prefix}/${bam_ip.simpleName}*.wig"), path("${file_prefix}/${bam_wce.simpleName}*.wig"), emit: wig
+ tuple val(file_id), path("${file_prefix}/${bam_ip.simpleName}*.wig"), emit: wig
tuple val(file_id), path("${file_prefix}/*.positions.bed"), emit: bed
script:
@@ -212,7 +212,7 @@ process dpeak_bam {
tuple val(file_id), path(bam_ip), path(bam_wce)
output:
- tuple val(file_id), path("${file_prefix}/${bam_ip.simpleName}*.wig"), path("${file_prefix}/${bam_wce.simpleName}*.wig"), emit: wig
+ tuple val(file_id), path("${file_prefix}/${bam_ip.simpleName}*.wig"), emit: wig
tuple val(file_id), path("${file_prefix}/*.positions.bed"), path("${file_prefix}/*.summit.bed"), emit: bed
tuple val(file_id), path("${file_prefix}/*.bed"), emit: bed
@@ -275,7 +275,7 @@ process dpeak_wig {
tuple val(file_id), path(wig_ip), path(wig_wce)
output:
- tuple val(file_id), path("${file_prefix}/${wig_ip.simpleName}.bgsub.wig"), path("${file_prefix}/${wig_wce.simpleName}.wig"), emit: wig
+ tuple val(file_id), path("${file_prefix}/${wig_ip.simpleName}.bgsub.wig"), emit: wig
tuple val(file_id), path("${file_prefix}/*.positions.bed"), path("${file_prefix}/*.summit.bed"), emit: bed
script:
@@ -343,7 +343,7 @@ process dpeak_wigvswig {
tuple val(file_id_b), path(wig_ip_b), path(wig_wce_b)
output:
- tuple val(file_id), path("${file_prefix}/${wig_ip_a.simpleName}.bgsub.wig"), path("${file_prefix}/${wig_wce_a.simpleName}.wig"), emit: wig
+ tuple val(file_id), path("${file_prefix}/${wig_ip_a.simpleName}.bgsub.wig"), emit: wig
tuple val(file_id), path("${file_prefix}/*.positions.bed"), path("${file_prefix}/*.summit.bed"), emit: bed
script:
--
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