diff --git a/src/nf_modules/bedtools/fasta_from_bed.config b/src/nf_modules/bedtools/fasta_from_bed.config
index 46e5e2faddd94546fa3f719e9faee07b4452c0c4..93e49c41c53cfa0b01ca92b67a2646cd19597cff 100644
--- a/src/nf_modules/bedtools/fasta_from_bed.config
+++ b/src/nf_modules/bedtools/fasta_from_bed.config
@@ -35,7 +35,7 @@ profiles {
   }
   ccin2p3 {
     singularity.enabled = true
-    singularity.cacheDir = "$baseDir/.src/singularity_in2p3/"
+    singularity.cacheDir = "$baseDir/.singularity_in2p3/"
     singularity.runOptions = "--bind /pbs,/sps,/scratch"
     process{
       withName: fasta_from_bed {
diff --git a/src/nf_modules/bowtie/indexing.config b/src/nf_modules/bowtie/indexing.config
index 8dfb6d77424f568a0f3a123eb12377298616b498..c67cef25d2ad1a3d9c01a93ce37b6c6e1ce6f74f 100644
--- a/src/nf_modules/bowtie/indexing.config
+++ b/src/nf_modules/bowtie/indexing.config
@@ -36,7 +36,7 @@ profiles {
   }
   ccin2p3 {
     singularity.enabled = true
-    singularity.cacheDir = "$baseDir/.src/singularity_in2p3/"
+    singularity.cacheDir = "$baseDir/.singularity_in2p3/"
     singularity.runOptions = "--bind /pbs,/sps,/scratch"
     process{
       withName: index_fasta {
diff --git a/src/nf_modules/bowtie/mapping_paired.config b/src/nf_modules/bowtie/mapping_paired.config
index b843424d7113d9089f73005c616c6d0da09b4384..ac4c35e46a11ddab8fe6c6dc33f67dd09e99eeae 100644
--- a/src/nf_modules/bowtie/mapping_paired.config
+++ b/src/nf_modules/bowtie/mapping_paired.config
@@ -36,7 +36,7 @@ profiles {
   }
   ccin2p3 {
     singularity.enabled = true
-    singularity.cacheDir = "$baseDir/.src/singularity_in2p3/"
+    singularity.cacheDir = "$baseDir/.singularity_in2p3/"
     singularity.runOptions = "--bind /pbs,/sps,/scratch"
     process{
       withName: mapping_fastq {
diff --git a/src/nf_modules/bowtie/mapping_single.config b/src/nf_modules/bowtie/mapping_single.config
index b843424d7113d9089f73005c616c6d0da09b4384..ac4c35e46a11ddab8fe6c6dc33f67dd09e99eeae 100644
--- a/src/nf_modules/bowtie/mapping_single.config
+++ b/src/nf_modules/bowtie/mapping_single.config
@@ -36,7 +36,7 @@ profiles {
   }
   ccin2p3 {
     singularity.enabled = true
-    singularity.cacheDir = "$baseDir/.src/singularity_in2p3/"
+    singularity.cacheDir = "$baseDir/.singularity_in2p3/"
     singularity.runOptions = "--bind /pbs,/sps,/scratch"
     process{
       withName: mapping_fastq {
diff --git a/src/nf_modules/bowtie2/indexing.config b/src/nf_modules/bowtie2/indexing.config
index 45ea20f30c4be5f6f42b0666997b8f4284248755..dd1e5e0648c2c38159cce2841d2201bd05d79e29 100644
--- a/src/nf_modules/bowtie2/indexing.config
+++ b/src/nf_modules/bowtie2/indexing.config
@@ -36,7 +36,7 @@ profiles {
   }
   ccin2p3 {
     singularity.enabled = true
-    singularity.cacheDir = "$baseDir/.src/singularity_in2p3/"
+    singularity.cacheDir = "$baseDir/.singularity_in2p3/"
     singularity.runOptions = "--bind /pbs,/sps,/scratch"
     process{
       withName: index_fasta {
diff --git a/src/nf_modules/bowtie2/mapping_paired.config b/src/nf_modules/bowtie2/mapping_paired.config
index ea515a40744a533ed883ca5ece2c9c34b2a305e9..c4b0fdd102fd74fa4151e7543e44f42ecfcb3cdf 100644
--- a/src/nf_modules/bowtie2/mapping_paired.config
+++ b/src/nf_modules/bowtie2/mapping_paired.config
@@ -36,7 +36,7 @@ profiles {
   }
   ccin2p3 {
     singularity.enabled = true
-    singularity.cacheDir = "$baseDir/.src/singularity_in2p3/"
+    singularity.cacheDir = "$baseDir/.singularity_in2p3/"
     singularity.runOptions = "--bind /pbs,/sps,/scratch"
     process{
       withName: mapping_fastq {
diff --git a/src/nf_modules/bowtie2/mapping_single.config b/src/nf_modules/bowtie2/mapping_single.config
index ea515a40744a533ed883ca5ece2c9c34b2a305e9..c4b0fdd102fd74fa4151e7543e44f42ecfcb3cdf 100644
--- a/src/nf_modules/bowtie2/mapping_single.config
+++ b/src/nf_modules/bowtie2/mapping_single.config
@@ -36,7 +36,7 @@ profiles {
   }
   ccin2p3 {
     singularity.enabled = true
-    singularity.cacheDir = "$baseDir/.src/singularity_in2p3/"
+    singularity.cacheDir = "$baseDir/.singularity_in2p3/"
     singularity.runOptions = "--bind /pbs,/sps,/scratch"
     process{
       withName: mapping_fastq {
diff --git a/src/nf_modules/bwa/indexing.config b/src/nf_modules/bwa/indexing.config
index b8336aeba11a49a530d7693d01a9b3b2ee758138..689b5fa2de7db12f2691efd89221fbaf66d7a950 100644
--- a/src/nf_modules/bwa/indexing.config
+++ b/src/nf_modules/bwa/indexing.config
@@ -36,7 +36,7 @@ profiles {
   }
   ccin2p3 {
     singularity.enabled = true
-    singularity.cacheDir = "$baseDir/.src/singularity_in2p3/"
+    singularity.cacheDir = "$baseDir/.singularity_in2p3/"
     singularity.runOptions = "--bind /pbs,/sps,/scratch"
     process{
       withName: index_fasta {
diff --git a/src/nf_modules/bwa/mapping_paired.config b/src/nf_modules/bwa/mapping_paired.config
index 6fba33f105d484bb68f159ce254e84e0788156f8..b2e198a0629c28595aaf4fedc7f83e7e5dd9232c 100644
--- a/src/nf_modules/bwa/mapping_paired.config
+++ b/src/nf_modules/bwa/mapping_paired.config
@@ -36,7 +36,7 @@ profiles {
   }
   ccin2p3 {
     singularity.enabled = true
-    singularity.cacheDir = "$baseDir/.src/singularity_in2p3/"
+    singularity.cacheDir = "$baseDir/.singularity_in2p3/"
     singularity.runOptions = "--bind /pbs,/sps,/scratch"
     process{
       withName: mapping_fastq {
diff --git a/src/nf_modules/cutadapt/adaptor_removal_paired.config b/src/nf_modules/cutadapt/adaptor_removal_paired.config
index b0797ffcc05de6d2082b6565e1707162a15607d2..13dfac50e21eb2b7a6bfbbd2cbad8bbceb6655cc 100644
--- a/src/nf_modules/cutadapt/adaptor_removal_paired.config
+++ b/src/nf_modules/cutadapt/adaptor_removal_paired.config
@@ -35,7 +35,7 @@ profiles {
   }
   ccin2p3 {
     singularity.enabled = true
-    singularity.cacheDir = "$baseDir/.src/singularity_in2p3/"
+    singularity.cacheDir = "$baseDir/.singularity_in2p3/"
     singularity.runOptions = "--bind /pbs,/sps,/scratch"
     process{
       withName: adaptor_removal {
diff --git a/src/nf_modules/cutadapt/adaptor_removal_single.config b/src/nf_modules/cutadapt/adaptor_removal_single.config
index b0797ffcc05de6d2082b6565e1707162a15607d2..13dfac50e21eb2b7a6bfbbd2cbad8bbceb6655cc 100644
--- a/src/nf_modules/cutadapt/adaptor_removal_single.config
+++ b/src/nf_modules/cutadapt/adaptor_removal_single.config
@@ -35,7 +35,7 @@ profiles {
   }
   ccin2p3 {
     singularity.enabled = true
-    singularity.cacheDir = "$baseDir/.src/singularity_in2p3/"
+    singularity.cacheDir = "$baseDir/.singularity_in2p3/"
     singularity.runOptions = "--bind /pbs,/sps,/scratch"
     process{
       withName: adaptor_removal {
diff --git a/src/nf_modules/cutadapt/trimming_paired.config b/src/nf_modules/cutadapt/trimming_paired.config
index 2acbf677cfc1a09efb2ab808274d5bdb9139530f..222663bc4cf84889c3ee183930271cd4687f0ab2 100644
--- a/src/nf_modules/cutadapt/trimming_paired.config
+++ b/src/nf_modules/cutadapt/trimming_paired.config
@@ -35,7 +35,7 @@ profiles {
   }
   ccin2p3 {
     singularity.enabled = true
-    singularity.cacheDir = "$baseDir/.src/singularity_in2p3/"
+    singularity.cacheDir = "$baseDir/.singularity_in2p3/"
     singularity.runOptions = "--bind /pbs,/sps,/scratch"
     process{
       withName: trimming {
diff --git a/src/nf_modules/cutadapt/trimming_single.config b/src/nf_modules/cutadapt/trimming_single.config
index 2acbf677cfc1a09efb2ab808274d5bdb9139530f..222663bc4cf84889c3ee183930271cd4687f0ab2 100644
--- a/src/nf_modules/cutadapt/trimming_single.config
+++ b/src/nf_modules/cutadapt/trimming_single.config
@@ -35,7 +35,7 @@ profiles {
   }
   ccin2p3 {
     singularity.enabled = true
-    singularity.cacheDir = "$baseDir/.src/singularity_in2p3/"
+    singularity.cacheDir = "$baseDir/.singularity_in2p3/"
     singularity.runOptions = "--bind /pbs,/sps,/scratch"
     process{
       withName: trimming {
diff --git a/src/nf_modules/deeptools/bam_to_bigwig.config b/src/nf_modules/deeptools/bam_to_bigwig.config
index bc680b8dd34ac7c76c9eb46cd22ee7a7d88b45fb..2cbf9d68a467a99ed2bdd59db667c7b5533c42be 100644
--- a/src/nf_modules/deeptools/bam_to_bigwig.config
+++ b/src/nf_modules/deeptools/bam_to_bigwig.config
@@ -55,7 +55,7 @@ profiles {
   }
   ccin2p3 {
     singularity.enabled = true
-    singularity.cacheDir = "$baseDir/.src/singularity_in2p3/"
+    singularity.cacheDir = "$baseDir/.singularity_in2p3/"
     singularity.runOptions = "--bind /pbs,/sps,/scratch"
     process{
       withName: index_bam {
diff --git a/src/nf_modules/deeptools/compute_matrix.config b/src/nf_modules/deeptools/compute_matrix.config
index 0cf27149478fad63bc97aa3bc549f1125d33173f..d1c05456c37ccf67b9a21ff48da719b45060aa50 100644
--- a/src/nf_modules/deeptools/compute_matrix.config
+++ b/src/nf_modules/deeptools/compute_matrix.config
@@ -36,7 +36,7 @@ profiles {
   }
   ccin2p3 {
     singularity.enabled = true
-    singularity.cacheDir = "$baseDir/.src/singularity_in2p3/"
+    singularity.cacheDir = "$baseDir/.singularity_in2p3/"
     singularity.runOptions = "--bind /pbs,/sps,/scratch"
     process{
       withName: compute_matrix {
diff --git a/src/nf_modules/deeptools/plot_profile.config b/src/nf_modules/deeptools/plot_profile.config
index ec20c4c8909cbb016c485f37f0a454aed55de305..c10e0edc66a119775a2600b2890eede8824a9468 100644
--- a/src/nf_modules/deeptools/plot_profile.config
+++ b/src/nf_modules/deeptools/plot_profile.config
@@ -36,7 +36,7 @@ profiles {
   }
   ccin2p3 {
     singularity.enabled = true
-    singularity.cacheDir = "$baseDir/.src/singularity_in2p3/"
+    singularity.cacheDir = "$baseDir/.singularity_in2p3/"
     singularity.runOptions = "--bind /pbs,/sps,/scratch"
     process{
       withName: plot_profile {
diff --git a/src/nf_modules/fastp/fastp_paired.config b/src/nf_modules/fastp/fastp_paired.config
index 42656ec4d8c3c2620f2a8c091aeb5be9f4bbedc6..d2ef420f462fcc3b43dfd29b3c24baeb0afc86db 100644
--- a/src/nf_modules/fastp/fastp_paired.config
+++ b/src/nf_modules/fastp/fastp_paired.config
@@ -35,7 +35,7 @@ profiles {
   }
   ccin2p3 {
     singularity.enabled = true
-    singularity.cacheDir = "$baseDir/.src/singularity_in2p3/"
+    singularity.cacheDir = "$baseDir/.singularity_in2p3/"
     singularity.runOptions = "--bind /pbs,/sps,/scratch"
     process{
       withName: fastp_fastq {
diff --git a/src/nf_modules/fastp/fastp_single.config b/src/nf_modules/fastp/fastp_single.config
index 42656ec4d8c3c2620f2a8c091aeb5be9f4bbedc6..d2ef420f462fcc3b43dfd29b3c24baeb0afc86db 100644
--- a/src/nf_modules/fastp/fastp_single.config
+++ b/src/nf_modules/fastp/fastp_single.config
@@ -35,7 +35,7 @@ profiles {
   }
   ccin2p3 {
     singularity.enabled = true
-    singularity.cacheDir = "$baseDir/.src/singularity_in2p3/"
+    singularity.cacheDir = "$baseDir/.singularity_in2p3/"
     singularity.runOptions = "--bind /pbs,/sps,/scratch"
     process{
       withName: fastp_fastq {
diff --git a/src/nf_modules/fastqc/fastqc_paired.config b/src/nf_modules/fastqc/fastqc_paired.config
index b7a74efe6b2658bffeac94538c33113c538de362..743c85ec616152e94ee9da40e254c8a6a826416a 100644
--- a/src/nf_modules/fastqc/fastqc_paired.config
+++ b/src/nf_modules/fastqc/fastqc_paired.config
@@ -35,7 +35,7 @@ profiles {
   }
   ccin2p3 {
     singularity.enabled = true
-    singularity.cacheDir = "$baseDir/.src/singularity_in2p3/"
+    singularity.cacheDir = "$baseDir/.singularity_in2p3/"
     singularity.runOptions = "--bind /pbs,/sps,/scratch"
     process{
       withName: fastqc_fastq {
diff --git a/src/nf_modules/fastqc/fastqc_single.config b/src/nf_modules/fastqc/fastqc_single.config
index b7a74efe6b2658bffeac94538c33113c538de362..743c85ec616152e94ee9da40e254c8a6a826416a 100644
--- a/src/nf_modules/fastqc/fastqc_single.config
+++ b/src/nf_modules/fastqc/fastqc_single.config
@@ -35,7 +35,7 @@ profiles {
   }
   ccin2p3 {
     singularity.enabled = true
-    singularity.cacheDir = "$baseDir/.src/singularity_in2p3/"
+    singularity.cacheDir = "$baseDir/.singularity_in2p3/"
     singularity.runOptions = "--bind /pbs,/sps,/scratch"
     process{
       withName: fastqc_fastq {
diff --git a/src/nf_modules/hisat2/indexing.config b/src/nf_modules/hisat2/indexing.config
index cfe8eab3a45d3a17bd86d8d514eee426481ba6fa..ab38148c140ddf8691df3b1ded842c328ad9f027 100644
--- a/src/nf_modules/hisat2/indexing.config
+++ b/src/nf_modules/hisat2/indexing.config
@@ -36,7 +36,7 @@ profiles {
   }
   ccin2p3 {
     singularity.enabled = true
-    singularity.cacheDir = "$baseDir/.src/singularity_in2p3/"
+    singularity.cacheDir = "$baseDir/.singularity_in2p3/"
     singularity.runOptions = "--bind /pbs,/sps,/scratch"
     process{
       withName: index_fasta {
diff --git a/src/nf_modules/hisat2/mapping_paired.config b/src/nf_modules/hisat2/mapping_paired.config
index 5aa8648162292d25615f5e9de0a11554bcad4c59..b3e4df5797cd3b98c7c28632f44944f50e5188fc 100644
--- a/src/nf_modules/hisat2/mapping_paired.config
+++ b/src/nf_modules/hisat2/mapping_paired.config
@@ -36,7 +36,7 @@ profiles {
   }
   ccin2p3 {
     singularity.enabled = true
-    singularity.cacheDir = "$baseDir/.src/singularity_in2p3/"
+    singularity.cacheDir = "$baseDir/.singularity_in2p3/"
     singularity.runOptions = "--bind /pbs,/sps,/scratch"
     process{
       withName: mapping_fastq {
diff --git a/src/nf_modules/hisat2/mapping_single.config b/src/nf_modules/hisat2/mapping_single.config
index 5aa8648162292d25615f5e9de0a11554bcad4c59..b3e4df5797cd3b98c7c28632f44944f50e5188fc 100644
--- a/src/nf_modules/hisat2/mapping_single.config
+++ b/src/nf_modules/hisat2/mapping_single.config
@@ -36,7 +36,7 @@ profiles {
   }
   ccin2p3 {
     singularity.enabled = true
-    singularity.cacheDir = "$baseDir/.src/singularity_in2p3/"
+    singularity.cacheDir = "$baseDir/.singularity_in2p3/"
     singularity.runOptions = "--bind /pbs,/sps,/scratch"
     process{
       withName: mapping_fastq {
diff --git a/src/nf_modules/htseq/htseq.config b/src/nf_modules/htseq/htseq.config
index 25d2ff6962c26d2dbaa17fc320bd8340b973ad7d..2eebc16c3af08c2bcf5924b42a6ed346a421a4f4 100644
--- a/src/nf_modules/htseq/htseq.config
+++ b/src/nf_modules/htseq/htseq.config
@@ -53,7 +53,7 @@ profiles {
   }
   ccin2p3 {
     singularity.enabled = true
-    singularity.cacheDir = "$baseDir/.src/singularity_in2p3/"
+    singularity.cacheDir = "$baseDir/.singularity_in2p3/"
     singularity.runOptions = "--bind /pbs,/sps,/scratch"
     process{
       withName: sort_bam {
diff --git a/src/nf_modules/kallisto/indexing.config b/src/nf_modules/kallisto/indexing.config
index 303abd88f3ed0e6d28d92fd09cf51b83bfa531ec..5dfd26a2e2125034582ab419119092be396502bb 100644
--- a/src/nf_modules/kallisto/indexing.config
+++ b/src/nf_modules/kallisto/indexing.config
@@ -36,7 +36,7 @@ profiles {
   }
   ccin2p3 {
     singularity.enabled = true
-    singularity.cacheDir = "$baseDir/.src/singularity_in2p3/"
+    singularity.cacheDir = "$baseDir/.singularity_in2p3/"
     singularity.runOptions = "--bind /pbs,/sps,/scratch"
     process{
       withName: index_fasta {
diff --git a/src/nf_modules/kallisto/mapping_paired.config b/src/nf_modules/kallisto/mapping_paired.config
index a6c4b7208d74c092ea312c0e892b0bb936d71ad4..04b61fea005056198f09c2a6b8418608dd1c94b4 100644
--- a/src/nf_modules/kallisto/mapping_paired.config
+++ b/src/nf_modules/kallisto/mapping_paired.config
@@ -36,7 +36,7 @@ profiles {
   }
   ccin2p3 {
     singularity.enabled = true
-    singularity.cacheDir = "$baseDir/.src/singularity_in2p3/"
+    singularity.cacheDir = "$baseDir/.singularity_in2p3/"
     singularity.runOptions = "--bind /pbs,/sps,/scratch"
     process{
       withName: mapping_fastq {
diff --git a/src/nf_modules/kallisto/mapping_single.config b/src/nf_modules/kallisto/mapping_single.config
index a6c4b7208d74c092ea312c0e892b0bb936d71ad4..04b61fea005056198f09c2a6b8418608dd1c94b4 100644
--- a/src/nf_modules/kallisto/mapping_single.config
+++ b/src/nf_modules/kallisto/mapping_single.config
@@ -36,7 +36,7 @@ profiles {
   }
   ccin2p3 {
     singularity.enabled = true
-    singularity.cacheDir = "$baseDir/.src/singularity_in2p3/"
+    singularity.cacheDir = "$baseDir/.singularity_in2p3/"
     singularity.runOptions = "--bind /pbs,/sps,/scratch"
     process{
       withName: mapping_fastq {
diff --git a/src/nf_modules/macs2/peak_calling.config b/src/nf_modules/macs2/peak_calling.config
index 10980bed96a3e458e6fba15e6eecd2e8261e1d78..35186c52c4701124f937a5daa625e72e8cb0a85e 100644
--- a/src/nf_modules/macs2/peak_calling.config
+++ b/src/nf_modules/macs2/peak_calling.config
@@ -36,7 +36,7 @@ profiles {
   }
   ccin2p3 {
     singularity.enabled = true
-    singularity.cacheDir = "$baseDir/.src/singularity_in2p3/"
+    singularity.cacheDir = "$baseDir/.singularity_in2p3/"
     singularity.runOptions = "--bind /pbs,/sps,/scratch"
     process{
       withName: peak_calling {
diff --git a/src/nf_modules/multiqc/multiqc_paired.config b/src/nf_modules/multiqc/multiqc_paired.config
index 689a8b1b4656b5c916dbb3fb31c7793c11d9d4e0..1cb17b7cd1cdb912c835877e043d1af80f34002d 100644
--- a/src/nf_modules/multiqc/multiqc_paired.config
+++ b/src/nf_modules/multiqc/multiqc_paired.config
@@ -58,7 +58,7 @@ profiles {
   }
   ccin2p3 {
     singularity.enabled = true
-    singularity.cacheDir = "$baseDir/.src/singularity_in2p3/"
+    singularity.cacheDir = "$baseDir/.singularity_in2p3/"
     singularity.runOptions = "--bind /pbs,/sps,/scratch"
     process{
       withName: fastq_fastqc {
diff --git a/src/nf_modules/multiqc/multiqc_single.config b/src/nf_modules/multiqc/multiqc_single.config
index 4d69a356e54f341f68ca088cd0fe77ea13f899f7..ba1bbe7c996ec4f7ae9ce1e2c4cefbcb883087b1 100644
--- a/src/nf_modules/multiqc/multiqc_single.config
+++ b/src/nf_modules/multiqc/multiqc_single.config
@@ -57,7 +57,7 @@ profiles {
   }
   ccin2p3 {
     singularity.enabled = true
-    singularity.cacheDir = "$baseDir/.src/singularity_in2p3/"
+    singularity.cacheDir = "$baseDir/.singularity_in2p3/"
     singularity.runOptions = "--bind /pbs,/sps,/scratch"
     process{
       withName: fastq_fastqc {
diff --git a/src/nf_modules/music/peak_calling_single.config b/src/nf_modules/music/peak_calling_single.config
index c4e6cdfc6d3b37254fc71625e01dfabebf4b9120..4a500bb9c52cecf86bca242df15b8024f65fe632 100644
--- a/src/nf_modules/music/peak_calling_single.config
+++ b/src/nf_modules/music/peak_calling_single.config
@@ -71,7 +71,7 @@ profiles {
   }
   ccin2p3 {
     singularity.enabled = true
-    singularity.cacheDir = "$baseDir/.src/singularity_in2p3/"
+    singularity.cacheDir = "$baseDir/.singularity_in2p3/"
     singularity.runOptions = "--bind /pbs,/sps,/scratch"
     process{
       withName: compute_mappability {
diff --git a/src/nf_modules/rsem/indexing.config b/src/nf_modules/rsem/indexing.config
index 446ebb61f152bb8126b5b77fbffabf44359c29d3..d5d3c7814b253b5869e799f7268f6985972d3d2c 100644
--- a/src/nf_modules/rsem/indexing.config
+++ b/src/nf_modules/rsem/indexing.config
@@ -36,7 +36,7 @@ profiles {
   }
   ccin2p3 {
     singularity.enabled = true
-    singularity.cacheDir = "$baseDir/.src/singularity_in2p3/"
+    singularity.cacheDir = "$baseDir/.singularity_in2p3/"
     singularity.runOptions = "--bind /pbs,/sps,/scratch"
     process{
       withName: index_fasta {
diff --git a/src/nf_modules/rsem/quantification_paired.config b/src/nf_modules/rsem/quantification_paired.config
index 11e4e349705b5539b0d702badec43200bdc98a29..bde03fc98ab828ebc58ee268a2dd9b1fe342f77b 100644
--- a/src/nf_modules/rsem/quantification_paired.config
+++ b/src/nf_modules/rsem/quantification_paired.config
@@ -36,7 +36,7 @@ profiles {
   }
   ccin2p3 {
     singularity.enabled = true
-    singularity.cacheDir = "$baseDir/.src/singularity_in2p3/"
+    singularity.cacheDir = "$baseDir/.singularity_in2p3/"
     singularity.runOptions = "--bind /pbs,/sps,/scratch"
     process{
       withName: mapping_fastq {
diff --git a/src/nf_modules/rsem/quantification_single.config b/src/nf_modules/rsem/quantification_single.config
index 11e4e349705b5539b0d702badec43200bdc98a29..bde03fc98ab828ebc58ee268a2dd9b1fe342f77b 100644
--- a/src/nf_modules/rsem/quantification_single.config
+++ b/src/nf_modules/rsem/quantification_single.config
@@ -36,7 +36,7 @@ profiles {
   }
   ccin2p3 {
     singularity.enabled = true
-    singularity.cacheDir = "$baseDir/.src/singularity_in2p3/"
+    singularity.cacheDir = "$baseDir/.singularity_in2p3/"
     singularity.runOptions = "--bind /pbs,/sps,/scratch"
     process{
       withName: mapping_fastq {
diff --git a/src/nf_modules/sambamba/index_bams.config b/src/nf_modules/sambamba/index_bams.config
index 7bb232abc10d1757ec14d17bf0ebd679917b70b5..3a20b7e120fceb5532a82555829a84e3fe5a435a 100644
--- a/src/nf_modules/sambamba/index_bams.config
+++ b/src/nf_modules/sambamba/index_bams.config
@@ -36,7 +36,7 @@ profiles {
   }
   ccin2p3 {
     singularity.enabled = true
-    singularity.cacheDir = "$baseDir/.src/singularity_in2p3/"
+    singularity.cacheDir = "$baseDir/.singularity_in2p3/"
     singularity.runOptions = "--bind /pbs,/sps,/scratch"
     process{
       withName: index_bam {
diff --git a/src/nf_modules/sambamba/sort_bams.config b/src/nf_modules/sambamba/sort_bams.config
index 1c1772ddebac0e88c70023bed043d5dca0c4fd9e..8612de4aacf04c0ee6eb41e318b118cf3e72b4a6 100644
--- a/src/nf_modules/sambamba/sort_bams.config
+++ b/src/nf_modules/sambamba/sort_bams.config
@@ -36,7 +36,7 @@ profiles {
   }
   ccin2p3 {
     singularity.enabled = true
-    singularity.cacheDir = "$baseDir/.src/singularity_in2p3/"
+    singularity.cacheDir = "$baseDir/.singularity_in2p3/"
     singularity.runOptions = "--bind /pbs,/sps,/scratch"
     process{
       withName: sort_bam {
diff --git a/src/nf_modules/sambamba/split_bams.config b/src/nf_modules/sambamba/split_bams.config
index 9c33cef9e6b3a1bc2f1bd0dcebe9df26e1f5b524..4ce0bcb06a61c5941223381c16f1996c48ee67b1 100644
--- a/src/nf_modules/sambamba/split_bams.config
+++ b/src/nf_modules/sambamba/split_bams.config
@@ -36,7 +36,7 @@ profiles {
   }
   ccin2p3 {
     singularity.enabled = true
-    singularity.cacheDir = "$baseDir/.src/singularity_in2p3/"
+    singularity.cacheDir = "$baseDir/.singularity_in2p3/"
     singularity.runOptions = "--bind /pbs,/sps,/scratch"
     process{
       withName: split_bam {
diff --git a/src/nf_modules/samblaster/dedup_sams.config b/src/nf_modules/samblaster/dedup_sams.config
index 813459688f05d7f0d0ef3a570fdea18465cb37ed..66f3051148ad1bcfddf4ca73c85b2b9040a3c963 100644
--- a/src/nf_modules/samblaster/dedup_sams.config
+++ b/src/nf_modules/samblaster/dedup_sams.config
@@ -36,7 +36,7 @@ profiles {
   }
   ccin2p3 {
     singularity.enabled = true
-    singularity.cacheDir = "$baseDir/.src/singularity_in2p3/"
+    singularity.cacheDir = "$baseDir/.singularity_in2p3/"
     singularity.runOptions = "--bind /pbs,/sps,/scratch"
     process{
       withName: dedup_sam {
diff --git a/src/nf_modules/samtools/filter_bams.config b/src/nf_modules/samtools/filter_bams.config
index 3c920d2a68b1aa75d663eeaa84e03ae2f570ced0..b2cdd8e5202f179833e877e8346430e01826fc17 100644
--- a/src/nf_modules/samtools/filter_bams.config
+++ b/src/nf_modules/samtools/filter_bams.config
@@ -36,7 +36,7 @@ profiles {
   }
   ccin2p3 {
     singularity.enabled = true
-    singularity.cacheDir = "$baseDir/.src/singularity_in2p3/"
+    singularity.cacheDir = "$baseDir/.singularity_in2p3/"
     singularity.runOptions = "--bind /pbs,/sps,/scratch"
     process{
       withName: filter_bam {
diff --git a/src/nf_modules/samtools/index_bams.config b/src/nf_modules/samtools/index_bams.config
index 5e02b2401e793e2a5889332b1177b37c12f8cd87..3e2156e16ee72fddb0b317c0dd22e3342fbe1cd8 100644
--- a/src/nf_modules/samtools/index_bams.config
+++ b/src/nf_modules/samtools/index_bams.config
@@ -35,7 +35,7 @@ profiles {
   }
   ccin2p3 {
     singularity.enabled = true
-    singularity.cacheDir = "$baseDir/.src/singularity_in2p3/"
+    singularity.cacheDir = "$baseDir/.singularity_in2p3/"
     singularity.runOptions = "--bind /pbs,/sps,/scratch"
     process{
       withName: index_bam {
diff --git a/src/nf_modules/samtools/sort_bams.config b/src/nf_modules/samtools/sort_bams.config
index bca093bfa60ab8ac99b6fdf82577a64ce49fa130..dd7cd38b2fe475ad409444ad2406e08c6a21b6cb 100644
--- a/src/nf_modules/samtools/sort_bams.config
+++ b/src/nf_modules/samtools/sort_bams.config
@@ -36,7 +36,7 @@ profiles {
   }
   ccin2p3 {
     singularity.enabled = true
-    singularity.cacheDir = "$baseDir/.src/singularity_in2p3/"
+    singularity.cacheDir = "$baseDir/.singularity_in2p3/"
     singularity.runOptions = "--bind /pbs,/sps,/scratch"
     process{
       withName: sort_bam {
diff --git a/src/nf_modules/samtools/split_bams.config b/src/nf_modules/samtools/split_bams.config
index 7190375317599976e9c371aa09e83e03114c6176..6c8ca3e963019002889a8f1ee3c3bb1166df7737 100644
--- a/src/nf_modules/samtools/split_bams.config
+++ b/src/nf_modules/samtools/split_bams.config
@@ -35,7 +35,7 @@ profiles {
   }
   ccin2p3 {
     singularity.enabled = true
-    singularity.cacheDir = "$baseDir/.src/singularity_in2p3/"
+    singularity.cacheDir = "$baseDir/.singularity_in2p3/"
     singularity.runOptions = "--bind /pbs,/sps,/scratch"
     process{
       withName: split_bam {
diff --git a/src/nf_modules/sratoolkit/fastqdump.config b/src/nf_modules/sratoolkit/fastqdump.config
index bdeff96d7e8497118d8dfd338221caf51dd5eb6b..e6e80c5dffe098e1e893af480600a6ce40661d03 100644
--- a/src/nf_modules/sratoolkit/fastqdump.config
+++ b/src/nf_modules/sratoolkit/fastqdump.config
@@ -35,7 +35,7 @@ profiles {
   }
   ccin2p3 {
     singularity.enabled = true
-    singularity.cacheDir = "$baseDir/.src/singularity_in2p3/"
+    singularity.cacheDir = "$baseDir/.singularity_in2p3/"
     singularity.runOptions = "--bind /pbs,/sps,/scratch"
     process{
       withName: fastq_dump {
diff --git a/src/nf_modules/star/indexing.config b/src/nf_modules/star/indexing.config
index 7046e632ebc76bc3dc667860521a1dfd12916900..34683657e3856d700dfc357591f46477598de70b 100644
--- a/src/nf_modules/star/indexing.config
+++ b/src/nf_modules/star/indexing.config
@@ -36,7 +36,7 @@ profiles {
   }
   ccin2p3 {
     singularity.enabled = true
-    singularity.cacheDir = "$baseDir/.src/singularity_in2p3/"
+    singularity.cacheDir = "$baseDir/.singularity_in2p3/"
     singularity.runOptions = "--bind /pbs,/sps,/scratch"
     process{
       withName: index_fasta {
diff --git a/src/nf_modules/star/mapping_paired.config b/src/nf_modules/star/mapping_paired.config
index 29ea1f2cea04101145e79aa57e9188cb1c89adfb..615404c4928c2281722ad15b50055b37eddfb7aa 100644
--- a/src/nf_modules/star/mapping_paired.config
+++ b/src/nf_modules/star/mapping_paired.config
@@ -36,7 +36,7 @@ profiles {
   }
   ccin2p3 {
     singularity.enabled = true
-    singularity.cacheDir = "$baseDir/.src/singularity_in2p3/"
+    singularity.cacheDir = "$baseDir/.singularity_in2p3/"
     singularity.runOptions = "--bind /pbs,/sps,/scratch"
     process{
       withName: mapping_fastq {
diff --git a/src/nf_modules/star/mapping_single.config b/src/nf_modules/star/mapping_single.config
index 29ea1f2cea04101145e79aa57e9188cb1c89adfb..615404c4928c2281722ad15b50055b37eddfb7aa 100644
--- a/src/nf_modules/star/mapping_single.config
+++ b/src/nf_modules/star/mapping_single.config
@@ -36,7 +36,7 @@ profiles {
   }
   ccin2p3 {
     singularity.enabled = true
-    singularity.cacheDir = "$baseDir/.src/singularity_in2p3/"
+    singularity.cacheDir = "$baseDir/.singularity_in2p3/"
     singularity.runOptions = "--bind /pbs,/sps,/scratch"
     process{
       withName: mapping_fastq {
diff --git a/src/nf_modules/subread/subread.config b/src/nf_modules/subread/subread.config
index 0e8b9a6c9a1b6c7ce429fc590e15d68699870f3c..68147001c4c8d630210e9c617b193d977212721c 100644
--- a/src/nf_modules/subread/subread.config
+++ b/src/nf_modules/subread/subread.config
@@ -53,7 +53,7 @@ profiles {
   }
   ccin2p3 {
     singularity.enabled = true
-    singularity.cacheDir = "$baseDir/.src/singularity_in2p3/"
+    singularity.cacheDir = "$baseDir/.singularity_in2p3/"
     singularity.runOptions = "--bind /pbs,/sps,/scratch"
     process{
       withName: sort_bam {
diff --git a/src/nf_modules/urqt/trimming_paired.config b/src/nf_modules/urqt/trimming_paired.config
index e7c8b6b1b1b876c17248e1dc3ef260655a1dba1c..a9f28632bc1552a9d497f9ddc8b7f73e26b9f6fe 100644
--- a/src/nf_modules/urqt/trimming_paired.config
+++ b/src/nf_modules/urqt/trimming_paired.config
@@ -36,7 +36,7 @@ profiles {
   }
   ccin2p3 {
     singularity.enabled = true
-    singularity.cacheDir = "$baseDir/.src/singularity_in2p3/"
+    singularity.cacheDir = "$baseDir/.singularity_in2p3/"
     singularity.runOptions = "--bind /pbs,/sps,/scratch"
     process{
       withName: trimming {
diff --git a/src/nf_modules/urqt/trimming_single.config b/src/nf_modules/urqt/trimming_single.config
index c8f16ba69614a7a4d7f64d71ef0f90578951494d..012b3f3afb518677d0aae318979701d32861cca5 100644
--- a/src/nf_modules/urqt/trimming_single.config
+++ b/src/nf_modules/urqt/trimming_single.config
@@ -36,7 +36,7 @@ profiles {
   }
   ccin2p3 {
     singularity.enabled = true
-    singularity.cacheDir = "$baseDir/.src/singularity_in2p3/"
+    singularity.cacheDir = "$baseDir/.singularity_in2p3/"
     singularity.runOptions = "--bind /pbs,/sps,/scratch"
     process{
       withName: trimming {