diff --git a/src/nf_modules/kallisto/indexing.config b/src/nf_modules/kallisto/indexing.config index a9e74c203c091e86728998b1f6fc15c3a1ad3031..a7604015cb79602725c793c89d1ae1440bdac176 100644 --- a/src/nf_modules/kallisto/indexing.config +++ b/src/nf_modules/kallisto/indexing.config @@ -56,7 +56,8 @@ profiles { stageInMode = "copy" stageOutMode = "rsync" executor = "sge" - clusterOptions = "-P P_lbmc -l os=cl7 -l sps=1 -r n" + clusterOptions = "-P P_lbmc -l os=cl7 -l sps=1 -r n \ + -o /sps/lbmc/lmodolo/logs/ -e /sps/lbmc/lmodolo/logs/" cpus = 1 queue = 'huge' }