diff --git a/src/nf_modules/fastp/main.nf b/src/nf_modules/fastp/main.nf
index 14a4391dc3d12e1aaaae3b727f1b5cf7fef8efa4..428da793f879b4a12227efb34881cf995a72b4f5 100644
--- a/src/nf_modules/fastp/main.nf
+++ b/src/nf_modules/fastp/main.nf
@@ -108,6 +108,7 @@ process fastp_accel_1splus {
     --disable_quality_filtering \
     --disable_length_filtering \
     --disable_trim_poly_g \
+    --detect_adapter_for_pe \
     --stdout \
     --in1 ${reads[0]} \
     --in2 ${reads[1]} \
@@ -132,6 +133,7 @@ process fastp_accel_1splus {
     --disable_quality_filtering \
     --disable_length_filtering \
     --disable_trim_poly_g \
+    --detect_adapter_for_pe \
     --stdout \
     --in1 ${reads[0]} \
     --out1 ${file_prefix}_R1_trim.fastq.gz \