From 189c84a340b7e316e97ef32507603dad634f7f2a Mon Sep 17 00:00:00 2001
From: Laurent Modolo <laurent.modolo@ens-lyon.fr>
Date: Fri, 8 Oct 2021 15:19:41 +0200
Subject: [PATCH] fix include path in danpos and ucsc
---
src/nf_modules/danpos/main.nf | 2 +-
src/nf_modules/ucsc/main.nf | 2 +-
2 files changed, 2 insertions(+), 2 deletions(-)
diff --git a/src/nf_modules/danpos/main.nf b/src/nf_modules/danpos/main.nf
index 41dfbfb4..8998f4c8 100644
--- a/src/nf_modules/danpos/main.nf
+++ b/src/nf_modules/danpos/main.nf
@@ -3,7 +3,7 @@ container_url = "biocontainers/danpos:${version}"
include {
bigwig2_to_wig2
-} from "./nf_modules/ucsc/main.nf"
+} from "./../ucsc/main.nf"
params.dpos = "--smooth_width 0 -n N "
params.dpos_out = ""
diff --git a/src/nf_modules/ucsc/main.nf b/src/nf_modules/ucsc/main.nf
index eefc67e8..37fed303 100644
--- a/src/nf_modules/ucsc/main.nf
+++ b/src/nf_modules/ucsc/main.nf
@@ -3,7 +3,7 @@ container_url = "lbmc/ucsc:${version}"
include {
index_fasta
-} from './nf_modules/samtools/main'
+} from './../samtools/main'
params.bedgraph_to_bigwig = ""
params.bedgraph_to_bigwig_out = ""
--
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