diff --git a/src/singularity_modules/fastp/0.19.7/build.sh b/src/singularity_modules/fastp/0.19.7/build.sh index 58127ff089d25f62c22269a935e630749efc3356..be161e19b88586b1469fdfd4c21c87f690cdd669 100755 --- a/src/singularity_modules/fastp/0.19.7/build.sh +++ b/src/singularity_modules/fastp/0.19.7/build.sh @@ -1,3 +1,3 @@ #/bin/sh -sudo singularity build --force bin/fastp:0.19.7.img docker://quay.io/biocontainers/fastp:0.19.7--hdbcaa40_0 && \ +sudo singularity build --force bin/fastp:0.19.7.img src/singularity_modules/fastp/0.19.7/fastp.def && \ singularity sign bin/fastp:0.19.7.img diff --git a/src/singularity_modules/fastp/0.19.7/fastp.def b/src/singularity_modules/fastp/0.19.7/fastp.def new file mode 100644 index 0000000000000000000000000000000000000000..eca9d45fae1debeb34329064e731376f42e5e69c --- /dev/null +++ b/src/singularity_modules/fastp/0.19.7/fastp.def @@ -0,0 +1,15 @@ +Bootstrap: docker +From: docker://quay.io/biocontainers/fastp:0.19.7--hdbcaa40_0 + +%labels +MAINTAINER Laurent Modolo + +%post +mkdir -p /sps /pbs /scratch +FASTP_VERSION=0.19.7 + +%environment +export FASTP_VERSION=0.19.7 + +%runscript +exec /bin/bash "$@"