From 03283317b9c90047403b324faa8f3bed19bf6dd1 Mon Sep 17 00:00:00 2001
From: Laurent Modolo <laurent@modolo.fr>
Date: Tue, 16 Oct 2018 15:56:35 +0200
Subject: [PATCH] README.md: add new tools to the table

---
 README.md | 6 ++++++
 1 file changed, 6 insertions(+)

diff --git a/README.md b/README.md
index 2322dbb4..0dfba8fe 100644
--- a/README.md
+++ b/README.md
@@ -81,13 +81,17 @@ src/nf_modules/Bowtie2/tests.sh
 | tool | nf module | docker module | sge module |
 |------|:---------:|:-------------:|:----------:|
 BEDtools | ok | ok | ok
+BFCtools |**no**  | ok | ok
+bioawk |**no**  | ok | ok
 Bowtie | ok | ok | **no**
 Bowtie2 | ok | ok | ok
+BWA | ok | ok | ok
 canu | ok | ok | ok
 cutadapt | ok | ok | ok
 deepTools | **no** | ok | ok
 FastQC | ok | ok | ok
 file_handle | **no** | ok | ok
+GATK | **no** | ok | ok
 HISAT2 | **no** | ok | **no**
 HTSeq | ok | ok | ok
 Kallisto | ok | ok | ok
@@ -97,6 +101,8 @@ MUSIC | ok | ok | ok
 picard | **no** | ok | ok
 pigz | **no** | ok | ok
 RSEM | ok | ok | ok
+sambamba | ok | ok | ok
+samblaster | ok | ok | ok
 SAMtools | ok | ok | ok
 SRAtoolkit | ok | ok | ok
 Salmon | **no** | ok | ok
-- 
GitLab