From f94ee439ec01303b492a916b500168261e71b5d5 Mon Sep 17 00:00:00 2001
From: nservant <nicolas.servant@curie.fr>
Date: Fri, 6 May 2022 15:12:17 +0200
Subject: [PATCH] [MODIF] update coller container
---
modules/local/cooltools/eigs-cis.nf | 6 +++---
1 file changed, 3 insertions(+), 3 deletions(-)
diff --git a/modules/local/cooltools/eigs-cis.nf b/modules/local/cooltools/eigs-cis.nf
index 0c35d8e..b65df9a 100644
--- a/modules/local/cooltools/eigs-cis.nf
+++ b/modules/local/cooltools/eigs-cis.nf
@@ -5,10 +5,10 @@
process CALL_COMPARTMENTS {
label 'process_medium'
- conda (params.enable_conda ? "bioconda::cooltools=0.5.1" : null)
+ conda (params.enable_conda ? "bioconda::cooltools=0.5.1 bioconda::ucsc-bedgraphtobigwig=377" : null)
container "${ workflow.containerEngine == 'singularity' && !task.ext.singularity_pull_docker_container ?
- 'https://depot.galaxyproject.org/singularity/cooltools:0.5.1--py37h37892f8_0' :
- 'quay.io/biocontainers/cooltools:0.5.1--py37h37892f8_0' }"
+ 'https://depot.galaxyproject.org/singularity/mulled-v2-c81d8d6b6acf4714ffaae1a274527a41958443f6:cc7ea58b8cefc76bed985dcfe261cb276ed9e0cf-0' :
+ 'quay.io/biocontainers/mulled-v2-c81d8d6b6acf4714ffaae1a274527a41958443f6:cc7ea58b8cefc76bed985dcfe261cb276ed9e0cf-0' }"
input:
tuple val(meta), path(cool), val(resolution)
--
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