From e036ef8557bd810e7a7b7ed47893bcfe852ff3b9 Mon Sep 17 00:00:00 2001
From: nservant <nicolas.servant@curie.fr>
Date: Wed, 2 Sep 2020 18:43:22 +0200
Subject: [PATCH] fix typo in md
---
README.md | 2 +-
docs/usage.md | 1 -
2 files changed, 1 insertion(+), 2 deletions(-)
diff --git a/README.md b/README.md
index 4425886..b8e1b10 100644
--- a/README.md
+++ b/README.md
@@ -85,7 +85,7 @@ found in the `docs/` directory:
5. [Troubleshooting](https://nf-co.re/usage/troubleshooting)
The nf-core/hic pipeline comes with documentation about the pipeline which
-you can read at [https://nf-core/hic/usage](https://nf-core/hic/usage or
+you can read at [https://nf-core/hic/usage](https://nf-core/hic/usage) or
find in the [`docs/` directory](docs).
For further information or help, don't hesitate to get in touch on
diff --git a/docs/usage.md b/docs/usage.md
index fed9082..d4af9fd 100644
--- a/docs/usage.md
+++ b/docs/usage.md
@@ -209,7 +209,6 @@ notation to specify read pairs.
If left unspecified, a default pattern is used: `data/*{1,2}.fastq.gz`
-
By default, the pipeline expects paired-end data. If you have single-end data,
you need to specify `--single_end` on the command line when you launch the pipeline.
A normal glob pattern, enclosed in quotation marks, can then be used for `--input`.
--
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