From d1f685e6b203f5732967e42729a148a596c3951a Mon Sep 17 00:00:00 2001 From: nservant <nicolas.servant@curie.fr> Date: Fri, 7 Aug 2020 18:57:44 +0200 Subject: [PATCH] update md --- README.md | 5 +++-- 1 file changed, 3 insertions(+), 2 deletions(-) diff --git a/README.md b/README.md index b80eb63..9448c9e 100644 --- a/README.md +++ b/README.md @@ -63,8 +63,7 @@ settings for your local compute environment. iv. Start running your own analysis! ```bash -nextflow run nf-core/hic -profile <docker/singularity/conda/institute> - --reads '*_R{1,2}.fastq.gz' --genome GRCh37 +nextflow run nf-core/hic -profile <docker/singularity/conda/institute> --reads '*_R{1,2}.fastq.gz' --genome GRCh37 ``` See [usage docs](docs/usage.md) for all of the available options when running @@ -83,7 +82,9 @@ found in the `docs/` directory: 3. [Running the pipeline](docs/usage.md) 4. [Output and how to interpret the results](docs/output.md) 5. [Troubleshooting](https://nf-co.re/usage/troubleshooting) + ======= + [](https://nfcore.slack.com/channels/hic) The nf-core/hic pipeline comes with documentation about the pipeline which -- GitLab