From c434caa37652dcb1ea702426ded2189a29c04b2a Mon Sep 17 00:00:00 2001
From: nf-core-bot <core@nf-co.re>
Date: Thu, 24 Mar 2022 11:38:57 +0000
Subject: [PATCH] Template update for nf-core/tools version 2.3.2
---
.github/PULL_REQUEST_TEMPLATE.md | 1 -
.github/workflows/awsfulltest.yml | 2 --
.github/workflows/awstest.yml | 2 --
.gitpod.yml | 2 +-
CHANGELOG.md | 2 --
5 files changed, 1 insertion(+), 8 deletions(-)
diff --git a/.github/PULL_REQUEST_TEMPLATE.md b/.github/PULL_REQUEST_TEMPLATE.md
index f4aec89..56233aa 100644
--- a/.github/PULL_REQUEST_TEMPLATE.md
+++ b/.github/PULL_REQUEST_TEMPLATE.md
@@ -10,7 +10,6 @@ Remember that PRs should be made against the dev branch, unless you're preparing
Learn more about contributing: [CONTRIBUTING.md](https://github.com/nf-core/hic/tree/master/.github/CONTRIBUTING.md)
-->
-<!-- markdownlint-disable ul-indent -->
## PR checklist
diff --git a/.github/workflows/awsfulltest.yml b/.github/workflows/awsfulltest.yml
index 303d385..4d71d9a 100644
--- a/.github/workflows/awsfulltest.yml
+++ b/.github/workflows/awsfulltest.yml
@@ -22,8 +22,6 @@ jobs:
workspace_id: ${{ secrets.TOWER_WORKSPACE_ID }}
access_token: ${{ secrets.TOWER_ACCESS_TOKEN }}
compute_env: ${{ secrets.TOWER_COMPUTE_ENV }}
- pipeline: ${{ github.repository }}
- revision: ${{ github.sha }}
workdir: s3://${{ secrets.AWS_S3_BUCKET }}/work/hic/work-${{ github.sha }}
parameters: |
{
diff --git a/.github/workflows/awstest.yml b/.github/workflows/awstest.yml
index d319986..f892cfd 100644
--- a/.github/workflows/awstest.yml
+++ b/.github/workflows/awstest.yml
@@ -17,8 +17,6 @@ jobs:
workspace_id: ${{ secrets.TOWER_WORKSPACE_ID }}
access_token: ${{ secrets.TOWER_ACCESS_TOKEN }}
compute_env: ${{ secrets.TOWER_COMPUTE_ENV }}
- pipeline: ${{ github.repository }}
- revision: ${{ github.sha }}
workdir: s3://${{ secrets.AWS_S3_BUCKET }}/work/hic/work-${{ github.sha }}
parameters: |
{
diff --git a/.gitpod.yml b/.gitpod.yml
index c452ee9..85d95ec 100644
--- a/.gitpod.yml
+++ b/.gitpod.yml
@@ -4,7 +4,7 @@ vscode:
extensions: # based on nf-core.nf-core-extensionpack
- codezombiech.gitignore # Language support for .gitignore files
# - cssho.vscode-svgviewer # SVG viewer
- - davidanson.vscode-markdownlint # Markdown/CommonMark linting and style checking for Visual Studio Code
+ - esbenp.prettier-vscode # Markdown/CommonMark linting and style checking for Visual Studio Code
- eamodio.gitlens # Quickly glimpse into whom, why, and when a line or code block was changed
- EditorConfig.EditorConfig # override user/workspace settings with settings found in .editorconfig files
- Gruntfuggly.todo-tree # Display TODO and FIXME in a tree view in the activity bar
diff --git a/CHANGELOG.md b/CHANGELOG.md
index 9dd2005..87c2402 100644
--- a/CHANGELOG.md
+++ b/CHANGELOG.md
@@ -11,8 +11,6 @@ Initial release of nf-core/hic, created with the [nf-core](https://nf-co.re/) te
### `Fixed`
-- Clarified conda usage and added an installation tutorial for Singularity since the one on Syllabs' website uses an outdate version of GO Compiler
-
### `Dependencies`
### `Deprecated`
--
GitLab