From ab9fa064c06bf8abcf69026ade7b5357a0519ec3 Mon Sep 17 00:00:00 2001 From: Nicolas Servant <nicolas.servant@curie.fr> Date: Tue, 19 May 2020 16:53:41 +0200 Subject: [PATCH] Update CHANGELOG.md Co-authored-by: Phil Ewels <phil.ewels@scilifelab.se> --- CHANGELOG.md | 10 ++++++++-- 1 file changed, 8 insertions(+), 2 deletions(-) diff --git a/CHANGELOG.md b/CHANGELOG.md index 5cc0f96..835ea6a 100644 --- a/CHANGELOG.md +++ b/CHANGELOG.md @@ -19,8 +19,14 @@ and this project adheres to [Semantic Versioning](http://semver.org/spec/v2.0.0. ### `Deprecated` -* --skipMaps, --skipIce, --skipCool, --skipMultiQC are deprecated and replaced by --skip_maps, --skip_ice, --skip_cool, --skip_multiqc -* --saveReference, --saveAlignedIntermediates, --saveInteractionBAM are replaced by --save_reference, --save_aligned_intermediates, --save_interaction_bam +* Command line options converted to `camel_case`: + * `--skipMaps` > `--skip_maps` + * `--skipIce` > `--skip_ice` + * `--skipCool` > `--skip_cool` + * `--skipMultiQC` > `--skip_multiqc` + * `--saveReference` > `--save_reference` + * `--saveAlignedIntermediates` > `--save_aligned_intermediates` + * `--saveInteractionBAM` > `--save_interaction_bam` ## v1.1.1 - 2020-04-02 -- GitLab