diff --git a/conf/public_aws_ecr.config b/conf/public_aws_ecr.config
index a12643582e8471c59c332df1eb8697402a981895..4979017e760018adb5923656635506aca6540012 100644
--- a/conf/public_aws_ecr.config
+++ b/conf/public_aws_ecr.config
@@ -15,6 +15,9 @@ process {
     withName: '.*:BOWTIE2_ALIGN' {
         container = 'quay.io/biocontainers/mulled-v2-ac74a7f02cebcfcc07d8e8d1d750af9c83b4d45a:a0ffedb52808e102887f6ce600d092675bf3528a-0'
     }
+    withName: '.*:BOWTIE2_ALIGN_TRIMMED' {
+        container = 'quay.io/biocontainers/mulled-v2-ac74a7f02cebcfcc07d8e8d1d750af9c83b4d45a:a0ffedb52808e102887f6ce600d092675bf3528a-0'
+    }
     withName: '.*:BUILD_CONTACT_MAPS' {
         container = 'quay.io/nf-core/ubuntu:20.04'
     }