diff --git a/modules/local/hicstuff/build_matrix.nf b/modules/local/hicstuff/build_matrix.nf index 0036dcb20d1134d4abbf5858d1a5509af2f9aa80..c81df964907a22f66c3f2bd3caaca5d09e3863ad 100644 --- a/modules/local/hicstuff/build_matrix.nf +++ b/modules/local/hicstuff/build_matrix.nf @@ -1,19 +1,21 @@ process BUILD_MATRIX { - tag '$idx_pairs' + tag "$idx_pairs" label 'process_single' conda "conda-forge::python=3.9 conda-forge::biopython=1.80 conda-forge::numpy=1.22.3 conda-forge::matplotlib=3.6.3 conda-forge::pandas=1.5.3" container = "lbmc/hicstuff:3.1.3" input: - tuple val(meta), path(idx_pairs) + tuple val(meta1), path(idx_pairs) tuple val(meta), path(fragments_list) output: - tuple val(meta), path("abs_fragments_contacts_weighted.txt"), emit: matrix + tuple val(meta), path("${meta1.id}_fragments_contacts_weighted.txt"), emit: matrix script: """ hicstuff_build_matrix.py -p ${idx_pairs} -f ${fragments_list} -t graal -o abs_fragments_contacts_weighted.txt + + mv abs_fragments_contacts_weighted.txt ${meta1.id}_fragments_contacts_weighted.txt """ }