From 856f9492b76be8ed3de3e3ed0c1b4eb2e39fc3e5 Mon Sep 17 00:00:00 2001
From: Maxime U Garcia <max.u.garcia@gmail.com>
Date: Thu, 1 Jun 2023 14:20:17 +0200
Subject: [PATCH] Update conf/public_aws_ecr.config
---
conf/public_aws_ecr.config | 28 ++++++++++++++--------------
1 file changed, 14 insertions(+), 14 deletions(-)
diff --git a/conf/public_aws_ecr.config b/conf/public_aws_ecr.config
index 4979017..abff277 100644
--- a/conf/public_aws_ecr.config
+++ b/conf/public_aws_ecr.config
@@ -12,46 +12,46 @@ docker.registry = 'public.ecr.aws'
podman.registry = 'public.ecr.aws'
process {
- withName: '.*:BOWTIE2_ALIGN' {
+ withName: 'BOWTIE2_ALIGN' {
container = 'quay.io/biocontainers/mulled-v2-ac74a7f02cebcfcc07d8e8d1d750af9c83b4d45a:a0ffedb52808e102887f6ce600d092675bf3528a-0'
}
- withName: '.*:BOWTIE2_ALIGN_TRIMMED' {
+ withName: 'BOWTIE2_ALIGN_TRIMMED' {
container = 'quay.io/biocontainers/mulled-v2-ac74a7f02cebcfcc07d8e8d1d750af9c83b4d45a:a0ffedb52808e102887f6ce600d092675bf3528a-0'
}
- withName: '.*:BUILD_CONTACT_MAPS' {
+ withName: 'BUILD_CONTACT_MAPS' {
container = 'quay.io/nf-core/ubuntu:20.04'
}
- withName: '.*:COMBINE_MATES' {
+ withName: 'COMBINE_MATES' {
container = 'quay.io/biocontainers/mulled-v2-c6ff206325681cbb9c9ef890bb8de554172c0483:713df51cd897ceb893b9a6e6420f527d83c2ed95-0'
}
- withName: '.*:COOLTOOLS_EIGSCIS' {
+ withName: 'COOLTOOLS_EIGSCIS' {
container = 'quay.io/biocontainers/mulled-v2-c81d8d6b6acf4714ffaae1a274527a41958443f6:cc7ea58b8cefc76bed985dcfe261cb276ed9e0cf-0'
}
- withName: '.*:GET_RESTRICTION_FRAGMENTS' {
+ withName: 'GET_RESTRICTION_FRAGMENTS' {
container = 'quay.io/biocontainers/mulled-v2-c6ff206325681cbb9c9ef890bb8de554172c0483:713df51cd897ceb893b9a6e6420f527d83c2ed95-0'
}
- withName: '.*:GET_VALID_INTERACTION' {
+ withName: 'GET_VALID_INTERACTION' {
container = 'quay.io/biocontainers/mulled-v2-c6ff206325681cbb9c9ef890bb8de554172c0483:713df51cd897ceb893b9a6e6420f527d83c2ed95-0'
}
- withName: '.*:GET_VALID_INTERACTION_DNASE' {
+ withName: 'GET_VALID_INTERACTION_DNASE' {
container = 'quay.io/biocontainers/mulled-v2-c6ff206325681cbb9c9ef890bb8de554172c0483:713df51cd897ceb893b9a6e6420f527d83c2ed95-0'
}
- withName: '.*:ICE_NORMALIZATION' {
+ withName: 'ICE_NORMALIZATION' {
container = 'quay.io/biocontainers/mulled-v2-c6ff206325681cbb9c9ef890bb8de554172c0483:713df51cd897ceb893b9a6e6420f527d83c2ed95-0'
}
- withName: '.*:MERGE_STATS' {
+ withName: 'MERGE_STATS' {
container = 'quay.io/biocontainers/mulled-v2-c6ff206325681cbb9c9ef890bb8de554172c0483:713df51cd897ceb893b9a6e6420f527d83c2ed95-0'
}
- withName: '.*:MERGE_VALID_INTERACTION' {
+ withName: 'MERGE_VALID_INTERACTION' {
container = 'quay.io/nf-core/ubuntu:20.04'
}
- withName: '.*:SAMPLESHEET_CHECK' {
+ withName: 'SAMPLESHEET_CHECK' {
container = 'quay.io/biocontainers/python:3.8.3'
}
- withName: '.*:SPLIT_COOLER_DUMP' {
+ withName: 'SPLIT_COOLER_DUMP' {
container = 'quay.io/nf-core/ubuntu:20.04'
}
- withName: '.*:TRIM_READS' {
+ withName: 'TRIM_READS' {
container = 'quay.io/nf-core/ubuntu:20.04'
}
}
--
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