diff --git a/docs/hicstuff_usage.md b/docs/hicstuff_usage.md index 9a20ce2dd69987b254e89bd3fba85611ce02a3df..aaf46ee4aaebbbafa0806225fe206c7c8a95c5e1 100644 --- a/docs/hicstuff_usage.md +++ b/docs/hicstuff_usage.md @@ -234,6 +234,10 @@ Binsize for plotting matrix. Default: 10000 --hicstuff_bin [binsize] ``` +> :warning: **Warning**: Depending of the size of your input, the bin size may not correspond and make the pipeline fail +>>10000 is default for human genome. +>>For yeast for example you may want to use a smaller bin + ### `--skip_plot_matrix` Do not plot matrices. Default: false @@ -242,10 +246,6 @@ Do not plot matrices. Default: false --skip_plot_matrix ``` -> :warning: **Warning**: Depending of the size of your input, the bin size may not correspond and make the pipeline fail ->>10000 is default for human genome. ->>For yeast for example you may want to use a smaller bin - ### Hicstuff options #### `--filter_event`