diff --git a/.nf-core-lint.yml b/.nf-core-lint.yml
index 39e22643f552de4cc97b14cb838d6051d7f279fb..f8ce3c1bbe35e3c7d67a8e9ef797d7e3ba5a1ab6 100644
--- a/.nf-core-lint.yml
+++ b/.nf-core-lint.yml
@@ -1,5 +1,4 @@
 files_unchanged:
-  - assets/multiqc_config.yaml
   - .github/CONTRIBUTING.md
   - .github/ISSUE_TEMPLATE/bug_report.md
-  - docs/README.md
\ No newline at end of file
+  - .github/PULL_REQUEST_TEMPLATE.md