From 7806177e5ba4f9bd08f0d0bf1a0fdff6b88c803b Mon Sep 17 00:00:00 2001
From: nservant <nicolas.servant@curie.fr>
Date: Fri, 29 Jul 2022 16:26:35 +0200
Subject: [PATCH] [BUG] update Arima preset #127
---
CHANGELOG.md | 4 ++++
modules/local/cooltools/{eigs-cis.nf => eigscis.nf} | 0
nextflow.config | 2 +-
3 files changed, 5 insertions(+), 1 deletion(-)
rename modules/local/cooltools/{eigs-cis.nf => eigscis.nf} (100%)
diff --git a/CHANGELOG.md b/CHANGELOG.md
index b66d2bc..085f64d 100644
--- a/CHANGELOG.md
+++ b/CHANGELOG.md
@@ -9,6 +9,10 @@ and this project adheres to [Semantic Versioning](https://semver.org/spec/v2.0.0
- DSL2 version of nf-core-hic pipeline
+### `Fixed`
+
+- Fix error in the Arima preset (#127)
+
## v1.3.1 - 2021-09-25
### `Fixed`
diff --git a/modules/local/cooltools/eigs-cis.nf b/modules/local/cooltools/eigscis.nf
similarity index 100%
rename from modules/local/cooltools/eigs-cis.nf
rename to modules/local/cooltools/eigscis.nf
diff --git a/nextflow.config b/nextflow.config
index b003a22..18694f2 100644
--- a/nextflow.config
+++ b/nextflow.config
@@ -50,7 +50,7 @@ params {
}
'arima' {
restriction_site='^GATC,G^ANT'
- ligation_site='GATCGATC,GATCGANT,GANTGATC,GANTGANT'
+ ligation_site='GATCGATC,GANTGATC,GANTANTC,GATCANTC'
}
}
--
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