diff --git a/CHANGELOG.md b/CHANGELOG.md index c62d20372f173c4275f5187c30bb472c99571eb1..aac514667058a584d1fba7e70cd1a61a4ebd7540 100644 --- a/CHANGELOG.md +++ b/CHANGELOG.md @@ -1,6 +1,6 @@ # nf-core/hic: Changelog -## v1.1.0 +## v1.1.0 - 2019-10-15 * Support 'N' base motif in restriction/ligation sites * Support multiple restriction enzymes/ligattion sites (comma separated) ([#31](https://github.com/nf-core/hic/issues/31)) diff --git a/main.nf b/main.nf index 67ba0b8931183c7035354e178cdd6fe47f08c99c..a0f7ac105b00a78b5fafd915531811dd9c51dfd8 100644 --- a/main.nf +++ b/main.nf @@ -85,7 +85,7 @@ def helpMessage() { * SET UP CONFIGURATION VARIABLES */ -// Show help emssage +// Show help message if (params.help){ helpMessage() exit 0 @@ -281,7 +281,7 @@ if(params.email) { summary['MultiQC maxsize'] = params.maxMultiqcEmailFileSize } log.info summary.collect { k,v -> "${k.padRight(18)}: $v" }.join("\n") -log.info "\033[2m----------------------------------------------------\033[0m" +log.info "-\033[2m--------------------------------------------------\033[0m-" // Check the hostnames against configured profiles checkHostname() @@ -953,10 +953,10 @@ workflow.onComplete { c_green = params.monochrome_logs ? '' : "\033[0;32m"; c_red = params.monochrome_logs ? '' : "\033[0;31m"; - if (workflow.stats.ignoredCountFmt > 0 && workflow.success) { + if (workflow.stats.ignoredCount > 0 && workflow.success) { log.info "${c_purple}Warning, pipeline completed, but with errored process(es) ${c_reset}" - log.info "${c_red}Number of ignored errored process(es) : ${workflow.stats.ignoredCountFmt} ${c_reset}" - log.info "${c_green}Number of successfully ran process(es) : ${workflow.stats.succeedCountFmt} ${c_reset}" + log.info "${c_red}Number of ignored errored process(es) : ${workflow.stats.ignoredCount} ${c_reset}" + log.info "${c_green}Number of successfully ran process(es) : ${workflow.stats.succeedCount} ${c_reset}" } if(workflow.success){